RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 DNAH8Q96JB1 4490 aa11.64□□□□□ -0.55
SHKBP1-203ENST00000594298 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
SHKBP1-203ENST00000594298 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
SHKBP1-203ENST00000594298 UQCC3Q6UW78 93 aa11.63□□□□□ -0.55
SHKBP1-203ENST00000594298 FLG2Q5D862 2391 aaPredicted RBP11.62□□□□□ -0.55
SHKBP1-203ENST00000594298 A0A1B0GW15 77 aa11.62□□□□□ -0.55
SHKBP1-203ENST00000594298 Q6ZSA8 131 aa11.62□□□□□ -0.55
SHKBP1-203ENST00000594298 RMI2Q96E14 147 aa11.62□□□□□ -0.55
SHKBP1-203ENST00000594298 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
SHKBP1-203ENST00000594298 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
SHKBP1-203ENST00000594298 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
SHKBP1-203ENST00000594298 J3QL48 77 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 S100A8P05109 93 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 COTL1Q14019 142 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 Q8N3U1 123 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 MRAP2Q96G30 205 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
SHKBP1-203ENST00000594298 PLA2G1BP04054 148 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-203ENST00000594298 RAB4AP20338 218 aa11.59□□□□□ -0.55
SHKBP1-203ENST00000594298 Q0VG73 95 aa11.59□□□□□ -0.55
SHKBP1-203ENST00000594298 WFDC2Q14508 124 aa11.59□□□□□ -0.55
SHKBP1-203ENST00000594298 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
SHKBP1-203ENST00000594298 PPP1R17O96001 155 aa11.58□□□□□ -0.56
SHKBP1-203ENST00000594298 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-203ENST00000594298 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
SHKBP1-203ENST00000594298 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 NCR2O95944 276 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 CAMPP49913 170 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 GAGE6Q13070 117 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 ST20Q9HBF5 79 aa11.57□□□□□ -0.56
SHKBP1-203ENST00000594298 TMEM218A2RU14 115 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 F8W036 122 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 UBE2L6O14933 153 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 CRPP02741 224 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 PMCHP20382 165 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 AMTP48728 403 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
SHKBP1-203ENST00000594298 HBBP68871 147 aa11.55□□□□□ -0.56
SHKBP1-203ENST00000594298 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
SHKBP1-203ENST00000594298 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
SHKBP1-203ENST00000594298 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
SHKBP1-203ENST00000594298 I3L3M4 83 aa11.54□□□□□ -0.56
SHKBP1-203ENST00000594298 RBX1P62877 108 aa11.54□□□□□ -0.56
SHKBP1-203ENST00000594298 ATP5L2Q7Z4Y8 100 aa11.54□□□□□ -0.56
SHKBP1-203ENST00000594298 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
SHKBP1-203ENST00000594298 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
SHKBP1-203ENST00000594298 LINC00862A6NCI5 91 aa11.53□□□□□ -0.56
SHKBP1-203ENST00000594298 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-203ENST00000594298 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
SHKBP1-203ENST00000594298 Q8N976 141 aa11.53□□□□□ -0.56
SHKBP1-203ENST00000594298 LECT2O14960 151 aa11.52□□□□□ -0.57
SHKBP1-203ENST00000594298 APCSP02743 223 aa11.52□□□□□ -0.57
SHKBP1-203ENST00000594298 MIAQ16674 131 aa11.52□□□□□ -0.57
SHKBP1-203ENST00000594298 SEC11CQ9BY50 192 aa11.52□□□□□ -0.57
SHKBP1-203ENST00000594298 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-203ENST00000594298 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
SHKBP1-203ENST00000594298 H7C423 109 aa11.51□□□□□ -0.57
SHKBP1-203ENST00000594298 CKS2P33552 79 aa11.51□□□□□ -0.57
SHKBP1-203ENST00000594298 C1orf43Q9BWL3 253 aa11.51□□□□□ -0.57
SHKBP1-203ENST00000594298 VCYO14598 125 aa11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 POLR2KP53803 58 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 CTDSP1Q9GZU7 261 aa11.5□□□□□ -0.57
SHKBP1-203ENST00000594298 TRBV27A0A0K0K1C4 114 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 GAS8-AS1O95177 125 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 RPS10P46783 165 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 SCXQ7RTU7 201 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 LINC00269Q8N2A0 174 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 IMMP2LQ96T52 175 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
SHKBP1-203ENST00000594298 PPBPP02775 128 aa11.48□□□□□ -0.57
SHKBP1-203ENST00000594298 ADCYAP1P18509 176 aa11.48□□□□□ -0.57
SHKBP1-203ENST00000594298 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-203ENST00000594298 BTF3L4Q96K17 158 aa11.48□□□□□ -0.57
SHKBP1-203ENST00000594298 C20orf78Q9BR46 151 aa11.48□□□□□ -0.57
SHKBP1-203ENST00000594298 FCER1GP30273 86 aa11.47□□□□□ -0.57
SHKBP1-203ENST00000594298 REG3AQ06141 175 aa11.47□□□□□ -0.57
SHKBP1-203ENST00000594298 NRACQ8N912 160 aa11.47□□□□□ -0.57
SHKBP1-203ENST00000594298 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
SHKBP1-203ENST00000594298 TRBV24-1A0A075B6N3 115 aa11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 TCAPO15273 167 aa11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 TSHBP01222 138 aa11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 KRTAP10-4P60372 401 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
SHKBP1-203ENST00000594298 RNASEKQ6P5S7 137 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms