RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TRBV6-5A0A0K0K1A5 114 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-212ENST00000591126 E7EUB6 86 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 SERF1AO75920 110 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 GAGE2EQ4V326 116 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 GAGE2DQ9UEU5 116 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 PCNX3Q9H6A9 2034 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 A0A087WZ39 114 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 ABCA2Q9BZC7 2435 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 IGLV2-18A0A075B6J9 118 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 ATRAIDQ6UW56 229 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 LINC01561Q8N1V8 128 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 MDFICQ9P1T7 246 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
SMAD4-212ENST00000591126 PRAC2D3DTV9 90 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 MLST8Q9BVC4 326 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 M0R2N4 97 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 PDE6GP18545 87 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 LINC00269Q8N2A0 174 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 PRB2P02812 416 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-212ENST00000591126 DIRC1Q969H9 104 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 MDFIQ99750 246 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 SHANK1Q9Y566 2161 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 J3QQQ9 107 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 EDN2P20800 178 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 ZC2HC1BQ5TFG8 222 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 DSCR8Q96T75 97 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 PYGO1Q9Y3Y4 419 aa4.6□□□□□ -1.67
SMAD4-212ENST00000591126 IGLV10-54A0A075B6I4 117 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 IGKV2D-26A0A0A0MRZ7 120 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 TRBV30A0A0K0K1B3 111 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 C18orf65Q6ZTR6 163 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 ATG2AQ2TAZ0 1938 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 TINCRA0A1B0GVN0 87 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 COX17Q14061 63 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 C9orf85Q96MD7 179 aa4.59□□□□□ -1.67
SMAD4-212ENST00000591126 SYS1-DBNDD2H3BUS1 97 aa4.59□□□□□ -1.68
SMAD4-212ENST00000591126 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.68
SMAD4-212ENST00000591126 KLK9Q2XQG4 91 aa4.59□□□□□ -1.68
SMAD4-212ENST00000591126 UTF1Q5T230 341 aa4.59□□□□□ -1.68
SMAD4-212ENST00000591126 Q6ZS46 218 aa4.59□□□□□ -1.68
SMAD4-212ENST00000591126 A0A1B0GV90 55 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 CDPF1Q6NVV7 123 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-212ENST00000591126 A0A0U1RRA0 63 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 SOCS3O14543 225 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 NPYP01303 97 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 ZNF726P1Q15940 193 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 C2orf48Q96LS8 159 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 A0A096LNT2 108 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 EGFEM1PQ0D2K5 195 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 Q6ZTC4 211 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 TOMM6Q96B49 74 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 TET2Q6N021 2002 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-212ENST00000591126 CSPG4Q6UVK1 2322 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 PLCE1Q9P212 2302 aa4.58□□□□□ -1.68
SMAD4-212ENST00000591126 TRBV20-1A0A075B6N2 111 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 TRAV8-2A0A0B4J237 113 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 IBA57-AS1B1ANH7 110 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 IGKV2-24A0A0C4DH68 120 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 TCL1BO95988 128 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 RBX1P62877 108 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 C11orf86A6NJI1 115 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 C20orf173Q96LM9 149 aa4.57□□□□□ -1.68
SMAD4-212ENST00000591126 BRWD1-AS2P59051 145 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 LINC01556Q5JQF7 62 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 ARFGEF3Q5TH69 2177 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 SPINK8P0C7L1 97 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 UBE2D3P61077 147 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 UBE2D2P62837 147 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 C9orf153Q5TBE3 101 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 FAM19A2Q8N3H0 131 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 IGLC6P0CF74 106 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 UBE2D4Q9Y2X8 147 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 A0A1B0GUV1 79 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 SEC61GP60059 68 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 SPATA12Q7Z6I5 190 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 C18orf32Q8TCD1 76 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 CEP295Q9C0D2 2601 aa4.56□□□□□ -1.68
SMAD4-212ENST00000591126 CCDC168Q8NDH2 2452 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 K7ERU9 68 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 COX7BP24311 80 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 LYPD6BQ8NI32 183 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 SND1-IT1Q9HBX3 110 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 XIRP2A4UGR9 3374 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 ORMDL1Q9P0S3 153 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 C16orf90A8MZG2 172 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 M0R378 163 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 VPREB1P12018 145 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 C11orf1Q9H5F2 150 aa4.55□□□□□ -1.68
SMAD4-212ENST00000591126 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-212ENST00000591126 NBDYA0A0U1RRE5 68 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms