RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 Q6Q795 121 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 Q8N1Y9 231 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
CXXC1-214ENST00000590901 HIVEP2P31629 2446 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 POM121L12Q8N7R1 296 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 TIMM17AQ99595 171 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 ESM1Q9NQ30 184 aa11.54□□□□□ -0.56
CXXC1-214ENST00000590901 A0A0B4J2C4 111 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
CXXC1-214ENST00000590901 DEFB136Q30KP8 78 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 H7C2G1 150 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
CXXC1-214ENST00000590901 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
CXXC1-214ENST00000590901 ATXN8Q156A1 80 aa11.52□□□□□ -0.56
CXXC1-214ENST00000590901 ZNF876PQ49A33 203 aa11.52□□□□□ -0.56
CXXC1-214ENST00000590901 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.56
CXXC1-214ENST00000590901 JMJD1CQ15652 2540 aa11.52□□□□□ -0.57
CXXC1-214ENST00000590901 F6UB75 175 aa11.52□□□□□ -0.57
CXXC1-214ENST00000590901 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
CXXC1-214ENST00000590901 VWFP04275 2813 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 A0A087WW49 117 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 NSD1Q96L73 2696 aaPredicted RBP11.51□□□□□ -0.57
CXXC1-214ENST00000590901 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 NDUFA4O00483 81 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
CXXC1-214ENST00000590901 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
CXXC1-214ENST00000590901 LINC01600Q96MT4 127 aa11.51□□□□□ -0.57
CXXC1-214ENST00000590901 TENM1Q9UKZ4 2725 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 TRAV2A0A0B4J234 112 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 VCYO14598 125 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 OVOL1O14753 267 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 GNRH2O43555 120 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 RNASE3P12724 160 aaKnown RBP11.5□□□□□ -0.57
CXXC1-214ENST00000590901 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
CXXC1-214ENST00000590901 Q1RN00 199 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 DEFB104AQ8WTQ1 72 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 RHPN1-AS1Q9BWJ2 59 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 KIF25-AS1Q9Y6Z4 181 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 H3BUA1 57 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 LEPROTO15243 131 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 NXPH4O95158 308 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 BRI3O95415 125 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 RNASE4P34096 147 aaKnown RBP11.5□□□□□ -0.57
CXXC1-214ENST00000590901 LINC00315P59091 139 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
CXXC1-214ENST00000590901 C15orf53Q8NAA6 179 aa11.49□□□□□ -0.57
CXXC1-214ENST00000590901 FAM110AQ9BQ89 295 aa11.49□□□□□ -0.57
CXXC1-214ENST00000590901 MUC4Q99102 2169 aa11.49□□□□□ -0.57
CXXC1-214ENST00000590901 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
CXXC1-214ENST00000590901 CFAP161Q6P656 301 aa11.49□□□□□ -0.57
CXXC1-214ENST00000590901 MUSTN1Q8IVN3 82 aa11.49□□□□□ -0.57
CXXC1-214ENST00000590901 TRBV10-2A0A0K0K1G8 114 aa11.48□□□□□ -0.57
CXXC1-214ENST00000590901 ELANEP08246 267 aa11.48□□□□□ -0.57
CXXC1-214ENST00000590901 SUMO4Q6EEV6 95 aa11.48□□□□□ -0.57
CXXC1-214ENST00000590901 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 H3BMM0 161 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 SOCS3O14543 225 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 UBE2WQ96B02 151 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 NOTCH3Q9UM47 2321 aa11.47□□□□□ -0.57
CXXC1-214ENST00000590901 DNAJC9-AS1A6NH13 148 aa11.46□□□□□ -0.57
CXXC1-214ENST00000590901 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
CXXC1-214ENST00000590901 FAM19A4Q96LR4 140 aa11.46□□□□□ -0.57
CXXC1-214ENST00000590901 ZNF580Q9UK33 172 aa11.46□□□□□ -0.57
CXXC1-214ENST00000590901 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.58
CXXC1-214ENST00000590901 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.58
CXXC1-214ENST00000590901 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.58
CXXC1-214ENST00000590901 LGALS9O00182 355 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 HERV-K104P63124 156 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 Q6ZSV7 163 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 APRG1Q8IVJ8 170 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
CXXC1-214ENST00000590901 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 SLURP1P55000 103 aa11.45□□□□□ -0.58
CXXC1-214ENST00000590901 C2CD3Q4AC94 2353 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 F5H697 171 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 M0R2P5 195 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 TRIAP1O43715 76 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 JPT2Q9H910 190 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 A0A0J9YX75 114 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 TRBV27A0A0K0K1C4 114 aa11.44□□□□□ -0.58
CXXC1-214ENST00000590901 A0A087WWL8 130 aa11.43□□□□□ -0.58
CXXC1-214ENST00000590901 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
CXXC1-214ENST00000590901 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
CXXC1-214ENST00000590901 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
CXXC1-214ENST00000590901 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
CXXC1-214ENST00000590901 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
CXXC1-214ENST00000590901 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
CXXC1-214ENST00000590901 HOXD3P31249 432 aaPredicted RBP11.43□□□□□ -0.58
CXXC1-214ENST00000590901 OPRPNQ99935 248 aaPredicted RBP11.42□□□□□ -0.58
CXXC1-214ENST00000590901 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
CXXC1-214ENST00000590901 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms