RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	CTRL	P40313	264 aa		13.85	□□□□□ -0.19
CIRBP-222	ENST00000589235	COTL1	Q14019	142 aa		13.84	□□□□□ -0.19
CIRBP-222	ENST00000589235	CLRN3	Q8NCR9	226 aa		13.84	□□□□□ -0.19
CIRBP-222	ENST00000589235	OCC1	Q8TAD7	63 aa		13.84	□□□□□ -0.19
CIRBP-222	ENST00000589235	CIRBP-AS1	Q8TBR5	109 aa		13.84	□□□□□ -0.19
CIRBP-222	ENST00000589235	CNFN	Q9BYD5	112 aa		13.83	□□□□□ -0.2
CIRBP-222	ENST00000589235	RNASE7	Q9H1E1	156 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-222	ENST00000589235	TMEM250	H0YL14	139 aa		13.82	□□□□□ -0.2
CIRBP-222	ENST00000589235	PRSS1	P07477	247 aa		13.82	□□□□□ -0.2
CIRBP-222	ENST00000589235	AMT	P48728	403 aa		13.82	□□□□□ -0.2
CIRBP-222	ENST00000589235	VPS13B	Q7Z7G8	4022 aa		13.8	□□□□□ -0.2
CIRBP-222	ENST00000589235		K7EN84	100 aa		13.8	□□□□□ -0.2
CIRBP-222	ENST00000589235	C9orf163	Q8N9P6	203 aa		13.8	□□□□□ -0.2
CIRBP-222	ENST00000589235	C20orf203	Q8NBC4	194 aa		13.8	□□□□□ -0.2
CIRBP-222	ENST00000589235	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.79	□□□□□ -0.2
CIRBP-222	ENST00000589235	IGLV10-54	A0A075B6I4	117 aa		13.79	□□□□□ -0.2
CIRBP-222	ENST00000589235	GATC	O43716	136 aa	Known RBP	13.79	□□□□□ -0.2
CIRBP-222	ENST00000589235	KRTAP26-1	Q6PEX3	210 aa		13.79	□□□□□ -0.2
CIRBP-222	ENST00000589235		A8MWL6	223 aa		13.78	□□□□□ -0.2
CIRBP-222	ENST00000589235	DNAH8	Q96JB1	4490 aa		13.78	□□□□□ -0.2
CIRBP-222	ENST00000589235	SRRM2	Q9UQ35	2752 aa	Known RBP	13.77	□□□□□ -0.2
CIRBP-222	ENST00000589235	IGLV4-60	A0A075B6I1	120 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	UQCC3	Q6UW78	93 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	FAM231D	Q6ZW35	169 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	GATD1	Q8NB37	220 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	BORCS7	Q96B45	105 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	AP5S1	Q9NUS5	200 aa		13.77	□□□□□ -0.21
CIRBP-222	ENST00000589235	NCR2	O95944	276 aa		13.76	□□□□□ -0.21
CIRBP-222	ENST00000589235	CEBPG	P53567	150 aa		13.76	□□□□□ -0.21
CIRBP-222	ENST00000589235	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.75	□□□□□ -0.21
CIRBP-222	ENST00000589235	hDV102S1	A0JD36	115 aa		13.75	□□□□□ -0.21
CIRBP-222	ENST00000589235	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.75	□□□□□ -0.21
CIRBP-222	ENST00000589235	AMMECR1L	Q6DCA0	310 aa		13.75	□□□□□ -0.21
CIRBP-222	ENST00000589235	GTSF1	Q8WW33	167 aa		13.75	□□□□□ -0.21
CIRBP-222	ENST00000589235	TRAV26-2	A0A0B4J265	109 aa		13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235		H7C423	109 aa		13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	CT83	Q5H943	113 aa		13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	CFAP161	Q6P656	301 aa		13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	LYPD6B	Q8NI32	183 aa		13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	EIF5A2	Q9GZV4	153 aa	Known RBP	13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	FLG2	Q5D862	2391 aa	Predicted RBP	13.74	□□□□□ -0.21
CIRBP-222	ENST00000589235	CNBP	P62633	177 aa	Known RBP	13.73	□□□□□ -0.21
CIRBP-222	ENST00000589235	HERC1	Q15751	4861 aa		13.72	□□□□□ -0.21
CIRBP-222	ENST00000589235	NDUFS6	O75380	124 aa	Known RBP	13.72	□□□□□ -0.21
CIRBP-222	ENST00000589235	APCS	P02743	223 aa		13.72	□□□□□ -0.21
CIRBP-222	ENST00000589235	FOXA3	P55318	350 aa	Predicted RBP	13.72	□□□□□ -0.21
CIRBP-222	ENST00000589235	GFRA4	Q9GZZ7	299 aa		13.71	□□□□□ -0.21
CIRBP-222	ENST00000589235	IGHV3-64	A0A075B6Q5	118 aa		13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	PMCH	P20382	165 aa		13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	RPL37A	P61513	92 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	RNASEK	Q6P5S7	137 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	SDIM1	Q6ZPB5	146 aa		13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	RPL39L	Q96EH5	51 aa	Known RBP	13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	DPH3	Q96FX2	82 aa		13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	SMIM7	Q9BQ49	75 aa		13.7	□□□□□ -0.22
CIRBP-222	ENST00000589235	SDHAF1	A6NFY7	115 aa		13.69	□□□□□ -0.22
CIRBP-222	ENST00000589235		I3L3M4	83 aa		13.69	□□□□□ -0.22
CIRBP-222	ENST00000589235	IGKV3OR2-268	A0A0C4DH90	116 aa		13.68	□□□□□ -0.22
CIRBP-222	ENST00000589235	GAGE12H	A6NDE8	117 aa		13.68	□□□□□ -0.22
CIRBP-222	ENST00000589235	TMEM101	Q96IK0	257 aa		13.68	□□□□□ -0.22
CIRBP-222	ENST00000589235	BTF3L4	Q96K17	158 aa		13.68	□□□□□ -0.22
CIRBP-222	ENST00000589235	MYCBP2	O75592	4640 aa		13.68	□□□□□ -0.22
CIRBP-222	ENST00000589235	FAM231B	A6NCW3	169 aa		13.67	□□□□□ -0.22
CIRBP-222	ENST00000589235	ZNF727	A8MUV8	499 aa		13.67	□□□□□ -0.22
CIRBP-222	ENST00000589235	ZNF25	P17030	456 aa	Predicted RBP	13.67	□□□□□ -0.22
CIRBP-222	ENST00000589235	TSKU	Q8WUA8	353 aa		13.67	□□□□□ -0.22
CIRBP-222	ENST00000589235	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	TRBV6-5	A0A0K0K1A5	114 aa		13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235		A0A1B0GUT8	65 aa		13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	OXT	P01178	125 aa		13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	KRTAP10-4	P60372	401 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	LINC01551	Q86U37	167 aa		13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	ST20	Q9HBF5	79 aa		13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-222	ENST00000589235	FGF6	P10767	208 aa		13.65	□□□□□ -0.22
CIRBP-222	ENST00000589235	TMEM191A	Q9H0A3	160 aa		13.65	□□□□□ -0.22
CIRBP-222	ENST00000589235	OSTC	Q9NRP0	149 aa		13.65	□□□□□ -0.22
CIRBP-222	ENST00000589235	HIGD1C	A8MV81	97 aa		13.64	□□□□□ -0.23
CIRBP-222	ENST00000589235	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.64	□□□□□ -0.23
CIRBP-222	ENST00000589235	RNF185	Q96GF1	192 aa		13.64	□□□□□ -0.23
CIRBP-222	ENST00000589235	TMEM218	A2RU14	115 aa		13.63	□□□□□ -0.23
CIRBP-222	ENST00000589235	OR5A1	Q8NGJ0	315 aa		13.62	□□□□□ -0.23
CIRBP-222	ENST00000589235	MRAP2	Q96G30	205 aa		13.62	□□□□□ -0.23
CIRBP-222	ENST00000589235	PPP1R17	O96001	155 aa		13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	SRP19	P09132	144 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	RPS10	P46783	165 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	RIG	Q13278	110 aa		13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	CIRBP	Q14011	172 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	FAM74A3	Q4VXF1	159 aa		13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	C10orf91	Q5T1B1	145 aa		13.61	□□□□□ -0.23
CIRBP-222	ENST00000589235	SLPI	P03973	132 aa		13.6	□□□□□ -0.23
CIRBP-222	ENST00000589235	C15orf56	Q8N910	161 aa		13.6	□□□□□ -0.23
CIRBP-222	ENST00000589235	SMDT1	Q9H4I9	107 aa		13.6	□□□□□ -0.23
CIRBP-222	ENST00000589235	PANO1	I0J062	215 aa		13.59	□□□□□ -0.23
CIRBP-222	ENST00000589235	RAB4A	P20338	218 aa		13.59	□□□□□ -0.23
CIRBP-222	ENST00000589235	PEA15	Q15121	130 aa		13.59	□□□□□ -0.23
CIRBP-222	ENST00000589235	TMEM241	Q24JQ0	296 aa		13.59	□□□□□ -0.23
CIRBP-222	ENST00000589235	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-222	ENST00000589235	ESD	P10768	282 aa		13.58	□□□□□ -0.24

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