RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OR10D4PQ8NGN7 298 aa15.63■□□□□ 0.09
ATG4D-209ENST00000588857 DAZ3Q9NR90 486 aaKnown RBP15.63■□□□□ 0.09
ATG4D-209ENST00000588857 IGHV3-38A0A0C4DH36 116 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 LEPROTL1O95214 131 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 GYPEP15421 78 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 BTF3P20290 206 aaKnown RBP15.62■□□□□ 0.09
ATG4D-209ENST00000588857 NANOS2P60321 138 aaKnown RBP15.62■□□□□ 0.09
ATG4D-209ENST00000588857 Q6ZTC4 211 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 A0A096LNJ9 63 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 G0S2P27469 103 aa15.62■□□□□ 0.09
ATG4D-209ENST00000588857 TRAV26-1A0A087WT03 109 aa15.61■□□□□ 0.09
ATG4D-209ENST00000588857 A0A0J9YY99 117 aa15.61■□□□□ 0.09
ATG4D-209ENST00000588857 COTL1Q14019 142 aa15.61■□□□□ 0.09
ATG4D-209ENST00000588857 VSIG2Q96IQ7 327 aa15.6■□□□□ 0.09
ATG4D-209ENST00000588857 HSPB8Q9UJY1 196 aa15.6■□□□□ 0.09
ATG4D-209ENST00000588857 LINC00694P0DN24 101 aa15.57■□□□□ 0.08
ATG4D-209ENST00000588857 C2orf66Q6UXQ4 117 aa15.57■□□□□ 0.08
ATG4D-209ENST00000588857 CYSLTR1Q9Y271 337 aa15.57■□□□□ 0.08
ATG4D-209ENST00000588857 HUWE1Q7Z6Z7 4374 aaKnown RBP15.56■□□□□ 0.08
ATG4D-209ENST00000588857 ATP6V0E2Q8NHE4 81 aa15.56■□□□□ 0.08
ATG4D-209ENST00000588857 TOMM6Q96B49 74 aa15.56■□□□□ 0.08
ATG4D-209ENST00000588857 DEFB131BA0A096LNP1 70 aa15.55■□□□□ 0.08
ATG4D-209ENST00000588857 LINC01549A6NIU2 74 aa15.55■□□□□ 0.08
ATG4D-209ENST00000588857 KRTDAPP60985 99 aa15.55■□□□□ 0.08
ATG4D-209ENST00000588857 LINC00173Q6ZV60 143 aa15.55■□□□□ 0.08
ATG4D-209ENST00000588857 C20orf203Q8NBC4 194 aa15.54■□□□□ 0.08
ATG4D-209ENST00000588857 MRPL23Q16540 153 aaKnown RBP15.53■□□□□ 0.08
ATG4D-209ENST00000588857 SCGB3A1Q96QR1 104 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 MAP1LC3CQ9BXW4 147 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 GTSF1LQ9H1H1 148 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 ICOSQ9Y6W8 199 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 STAB2Q8WWQ8 2551 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 ATP5LO75964 103 aa15.53■□□□□ 0.08
ATG4D-209ENST00000588857 TRAV10A0A0B4J240 114 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 H3BNG1 76 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 C3orf79P0CE67 100 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 RPL39P62891 51 aaKnown RBP15.52■□□□□ 0.07
ATG4D-209ENST00000588857 TMEM97Q5BJF2 176 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 SH2D6Q7Z4S9 175 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 IFI27L1Q96BM0 104 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 WWC2-AS2Q96NR7 200 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 CHCHD7Q9BUK0 85 aa15.52■□□□□ 0.07
ATG4D-209ENST00000588857 NTM-AS1Q6ZSK4 140 aa15.51■□□□□ 0.07
ATG4D-209ENST00000588857 A0A096LPF7 62 aa15.5■□□□□ 0.07
ATG4D-209ENST00000588857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-209ENST00000588857 ERASQ7Z444 233 aa15.49■□□□□ 0.07
ATG4D-209ENST00000588857 TRBV25-1A0A075B6N4 114 aa15.49■□□□□ 0.07
ATG4D-209ENST00000588857 H0Y8G0 127 aa15.48■□□□□ 0.07
ATG4D-209ENST00000588857 SYS1-DBNDD2H3BUS1 97 aa15.48■□□□□ 0.07
ATG4D-209ENST00000588857 TMEM243Q9BU79 118 aa15.48■□□□□ 0.07
ATG4D-209ENST00000588857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-209ENST00000588857 TRBV6-8A0A0A6YYG3 113 aa15.47■□□□□ 0.07
ATG4D-209ENST00000588857 IGKV2-29A2NJV5 120 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-209ENST00000588857 SCGB1D1O95968 90 aa15.47■□□□□ 0.07
ATG4D-209ENST00000588857 IGIPA6NJ69 53 aa15.46■□□□□ 0.07
ATG4D-209ENST00000588857 PRSS1P07477 247 aa15.46■□□□□ 0.07
ATG4D-209ENST00000588857 JOSD1Q15040 202 aaPredicted RBP15.46■□□□□ 0.07
ATG4D-209ENST00000588857 Q6ZN92 141 aa15.46■□□□□ 0.07
ATG4D-209ENST00000588857 TMEM141Q96I45 108 aa15.46■□□□□ 0.07
ATG4D-209ENST00000588857 UBE2L6O14933 153 aa15.45■□□□□ 0.06
ATG4D-209ENST00000588857 TIMM17AQ99595 171 aa15.45■□□□□ 0.06
ATG4D-209ENST00000588857 PET117Q6UWS5 81 aa15.45■□□□□ 0.06
ATG4D-209ENST00000588857 PYY3Q5JQD4 70 aa15.44■□□□□ 0.06
ATG4D-209ENST00000588857 PYGO1Q9Y3Y4 419 aa15.44■□□□□ 0.06
ATG4D-209ENST00000588857 SMAGPQ0VAQ4 97 aa15.43■□□□□ 0.06
ATG4D-209ENST00000588857 SPATA12Q7Z6I5 190 aa15.43■□□□□ 0.06
ATG4D-209ENST00000588857 CHCHD5Q9BSY4 110 aa15.43■□□□□ 0.06
ATG4D-209ENST00000588857 SPANXA1Q9NS26 97 aa15.43■□□□□ 0.06
ATG4D-209ENST00000588857 C20orf202A1L168 122 aa15.42■□□□□ 0.06
ATG4D-209ENST00000588857 H7C423 109 aa15.42■□□□□ 0.06
ATG4D-209ENST00000588857 SMIM6P0DI80 62 aa15.42■□□□□ 0.06
ATG4D-209ENST00000588857 UBE2D4Q9Y2X8 147 aa15.42■□□□□ 0.06
ATG4D-209ENST00000588857 DGAT2L7PQ6IED9 249 aa15.41■□□□□ 0.06
ATG4D-209ENST00000588857 AMMECR1LQ6DCA0 310 aa15.41■□□□□ 0.06
ATG4D-209ENST00000588857 TIMM21Q9BVV7 248 aa15.41■□□□□ 0.06
ATG4D-209ENST00000588857 FGF6P10767 208 aa15.4■□□□□ 0.06
ATG4D-209ENST00000588857 PAPPA-AS1Q5QFB9 102 aa15.4■□□□□ 0.06
ATG4D-209ENST00000588857 CEMP1Q6PRD7 247 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-209ENST00000588857 BAALCQ8WXS3 180 aa15.4■□□□□ 0.06
ATG4D-209ENST00000588857 NPSP0C0P6 89 aa15.39■□□□□ 0.05
ATG4D-209ENST00000588857 MRPL52Q86TS9 123 aaKnown RBP15.39■□□□□ 0.05
ATG4D-209ENST00000588857 Q8N976 141 aa15.39■□□□□ 0.05
ATG4D-209ENST00000588857 C15orf53Q8NAA6 179 aa15.39■□□□□ 0.05
ATG4D-209ENST00000588857 OPRPNQ99935 248 aaPredicted RBP15.39■□□□□ 0.05
ATG4D-209ENST00000588857 GAGE6Q13070 117 aa15.38■□□□□ 0.05
ATG4D-209ENST00000588857 LYPD5Q6UWN5 251 aa15.38■□□□□ 0.05
ATG4D-209ENST00000588857 IGLV4-3A0A075B6K6 122 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 TRAV12-1A0A0B4J245 112 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 LINC01545Q5VT33 79 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 LGALS9CQ6DKI2 356 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 TMEM101Q96IK0 257 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 VCX2Q9H322 139 aa15.37■□□□□ 0.05
ATG4D-209ENST00000588857 TIRAPP58753 221 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 PMVKQ15126 192 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 LELP1Q5T871 98 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 CSDC2Q9Y534 153 aaKnown RBP15.36■□□□□ 0.05
ATG4D-209ENST00000588857 IGLL5B9A064 214 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 OR5A1Q8NGJ0 315 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 PMCHL2Q9BQD1 86 aa15.36■□□□□ 0.05
ATG4D-209ENST00000588857 A0A087WX48 190 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms