RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.28
CAPNS1-205ENST00000588780 BORCS7-ASMTA0A0B4J1R7 106 aa13.32□□□□□ -0.28
CAPNS1-205ENST00000588780 MAP1LC3B2A6NCE7 125 aa13.32□□□□□ -0.28
CAPNS1-205ENST00000588780 BAGE2Q86Y30 109 aa13.32□□□□□ -0.28
CAPNS1-205ENST00000588780 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
CAPNS1-205ENST00000588780 MAP1LC3BQ9GZQ8 125 aa13.32□□□□□ -0.28
CAPNS1-205ENST00000588780 C1orf137Q5JT78 98 aa13.31□□□□□ -0.28
CAPNS1-205ENST00000588780 RPL7L1Q6DKI1 246 aaKnown RBP13.31□□□□□ -0.28
CAPNS1-205ENST00000588780 S100ZQ8WXG8 99 aa13.31□□□□□ -0.28
CAPNS1-205ENST00000588780 NIT2Q9NQR4 276 aa13.31□□□□□ -0.28
CAPNS1-205ENST00000588780 UPK1BO75841 260 aa13.3□□□□□ -0.28
CAPNS1-205ENST00000588780 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
CAPNS1-205ENST00000588780 XCL1P47992 114 aa13.3□□□□□ -0.28
CAPNS1-205ENST00000588780 FHITP49789 147 aa13.3□□□□□ -0.28
CAPNS1-205ENST00000588780 FOXI1Q12951 378 aa13.29□□□□□ -0.28
CAPNS1-205ENST00000588780 IGHV1-58A0A0C4DH39 117 aa13.28□□□□□ -0.28
CAPNS1-205ENST00000588780 ZNF561-AS1K7EIQ3 104 aa13.28□□□□□ -0.28
CAPNS1-205ENST00000588780 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
CAPNS1-205ENST00000588780 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
CAPNS1-205ENST00000588780 PAGE4O60829 102 aa13.27□□□□□ -0.29
CAPNS1-205ENST00000588780 FER1L6-AS1Q8NA97 138 aa13.27□□□□□ -0.29
CAPNS1-205ENST00000588780 DIRC1Q969H9 104 aa13.27□□□□□ -0.29
CAPNS1-205ENST00000588780 LOC107984640A0A0U1RRK4 108 aa13.25□□□□□ -0.29
CAPNS1-205ENST00000588780 A0A1W2PNN7 141 aa13.25□□□□□ -0.29
CAPNS1-205ENST00000588780 MLST8Q9BVC4 326 aa13.25□□□□□ -0.29
CAPNS1-205ENST00000588780 FAT4Q6V0I7 4981 aa13.25□□□□□ -0.29
CAPNS1-205ENST00000588780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
CAPNS1-205ENST00000588780 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
CAPNS1-205ENST00000588780 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
CAPNS1-205ENST00000588780 CCL25O15444 150 aa13.23□□□□□ -0.29
CAPNS1-205ENST00000588780 PFDN1O60925 122 aa13.23□□□□□ -0.29
CAPNS1-205ENST00000588780 TRGC1P0CF51 173 aa13.23□□□□□ -0.29
CAPNS1-205ENST00000588780 IFITM3Q01628 133 aa13.22□□□□□ -0.29
CAPNS1-205ENST00000588780 ISOC2Q96AB3 205 aa13.22□□□□□ -0.29
CAPNS1-205ENST00000588780 FGF6P10767 208 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 EIF5AP63241 154 aaKnown RBP13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 OR5A1Q8NGJ0 315 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 BTF3L4Q96K17 158 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 MED28Q9H204 178 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 NDUFA13Q9P0J0 144 aa13.21□□□□□ -0.29
CAPNS1-205ENST00000588780 A0A1B0GV50 99 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 APCSP02743 223 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 BCL2P10415 239 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 NTF3P20783 257 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 CAMPP49913 170 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 UBE2D1P51668 147 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 DEFA1P59665 94 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 PHF5AQ7RTV0 110 aaKnown RBP13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
CAPNS1-205ENST00000588780 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
CAPNS1-205ENST00000588780 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
CAPNS1-205ENST00000588780 Q6ZNX1 250 aa13.19□□□□□ -0.3
CAPNS1-205ENST00000588780 LINC00299Q6ZSB3 139 aa13.19□□□□□ -0.3
CAPNS1-205ENST00000588780 IGLV1-50A0A075B6I6 118 aa13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 LINC00959A0A1B0GUT2 108 aa13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 SS18Q15532 418 aa13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 LCE2AQ5TA79 106 aaPredicted RBP13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 TMUB2Q71RG4 321 aa13.18□□□□□ -0.3
CAPNS1-205ENST00000588780 FXYD6-FXYD2A0A087WZ82 144 aa13.17□□□□□ -0.3
CAPNS1-205ENST00000588780 TRAV1-1A0A0B4J248 108 aa13.17□□□□□ -0.3
CAPNS1-205ENST00000588780 H7C423 109 aa13.17□□□□□ -0.3
CAPNS1-205ENST00000588780 A0A087WZ39 114 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 F2Z2F3 143 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 H0Y9J4 135 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 NCR2O95944 276 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 Q5BKY6 102 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 ALG5Q9Y673 324 aa13.16□□□□□ -0.3
CAPNS1-205ENST00000588780 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 MALP21145 153 aa13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 SFT2D1Q8WV19 159 aa13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 CAMK2N2Q96S95 79 aa13.15□□□□□ -0.3
CAPNS1-205ENST00000588780 APOMO95445 188 aa13.14□□□□□ -0.31
CAPNS1-205ENST00000588780 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
CAPNS1-205ENST00000588780 LYZL1Q6UWQ5 148 aa13.14□□□□□ -0.31
CAPNS1-205ENST00000588780 IFNA1P01562 189 aa13.13□□□□□ -0.31
CAPNS1-205ENST00000588780 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
CAPNS1-205ENST00000588780 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
CAPNS1-205ENST00000588780 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
CAPNS1-205ENST00000588780 TWIST1Q15672 202 aa13.12□□□□□ -0.31
CAPNS1-205ENST00000588780 NUP35Q8NFH5 326 aa13.11□□□□□ -0.31
CAPNS1-205ENST00000588780 RPL39LQ96EH5 51 aaKnown RBP13.11□□□□□ -0.31
CAPNS1-205ENST00000588780 RPL13AP40429 203 aaKnown RBP13.1□□□□□ -0.31
CAPNS1-205ENST00000588780 KCNRGQ8N5I3 272 aa13.1□□□□□ -0.31
CAPNS1-205ENST00000588780 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
CAPNS1-205ENST00000588780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 TSPAN13O95857 204 aa13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 PMCHP20382 165 aa13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 MEF2BQ02080 365 aaPredicted RBP13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 CENPWQ5EE01 88 aa13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 TSKUQ8WUA8 353 aa13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
CAPNS1-205ENST00000588780 SDHAF1A6NFY7 115 aa13.07□□□□□ -0.32
CAPNS1-205ENST00000588780 COX7A2LO14548 114 aa13.07□□□□□ -0.32
CAPNS1-205ENST00000588780 BCL2L11O43521 198 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms