RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 CCL22O00626 93 aa2.96□□□□□ -1.94
VMP1-208ENST00000588617 APODP05090 189 aa2.96□□□□□ -1.94
VMP1-208ENST00000588617 SELENOWP63302 87 aa2.96□□□□□ -1.94
VMP1-208ENST00000588617 ATP6V0E2Q8NHE4 81 aa2.96□□□□□ -1.94
VMP1-208ENST00000588617 PRUNE2Q8WUY3 3088 aa2.96□□□□□ -1.94
VMP1-208ENST00000588617 TRAV23DV6A0A075B6W5 121 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 M0R2P5 195 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 GNG7O60262 68 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 RRAS2P62070 204 aaPredicted RBP2.95□□□□□ -1.94
VMP1-208ENST00000588617 ATOH7Q8N100 152 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 C10orf105Q8TEF2 133 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 COX14Q96I36 57 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 LINC00470Q9BZP3 86 aa2.95□□□□□ -1.94
VMP1-208ENST00000588617 TNRC6AQ8NDV7 1962 aaKnown RBP2.94□□□□□ -1.94
VMP1-208ENST00000588617 C10orf142B7Z368 130 aa2.94□□□□□ -1.94
VMP1-208ENST00000588617 EMX2Q04743 252 aa2.94□□□□□ -1.94
VMP1-208ENST00000588617 LINC00526Q96FQ7 95 aa2.94□□□□□ -1.94
VMP1-208ENST00000588617 PPP3R2Q96LZ3 170 aa2.94□□□□□ -1.94
VMP1-208ENST00000588617 MUC22E2RYF6 1773 aaPredicted RBP2.94□□□□□ -1.94
VMP1-208ENST00000588617 CHD3Q12873 2000 aaKnown RBP2.93□□□□□ -1.94
VMP1-208ENST00000588617 FAM25AB3EWG3 89 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 FAM25CB3EWG5 89 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 FAM25GB3EWG6 89 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 SLC25A26Q70HW3 274 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 PLPP5Q8NEB5 264 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 TAS2R8Q9NYW2 309 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 MUC3AQ02505 3323 aa2.93□□□□□ -1.94
VMP1-208ENST00000588617 A0A0G2JMM0 328 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 A0A0J9YY99 117 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 J3QLW9 94 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 LINC00032P0C843 101 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 IL7P13232 177 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 POLR2JP52435 117 aaKnown RBP2.92□□□□□ -1.94
VMP1-208ENST00000588617 RPS27LQ71UM5 84 aaKnown RBP2.92□□□□□ -1.94
VMP1-208ENST00000588617 DEFB107AQ8IZN7 70 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 TMEM191AQ9H0A3 160 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 CCDC167Q9P0B6 97 aa2.92□□□□□ -1.94
VMP1-208ENST00000588617 MYO18AQ92614 2054 aaKnown RBP2.92□□□□□ -1.94
VMP1-208ENST00000588617 TRIOO75962 3097 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 SORL1Q92673 2214 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 PLXNA2O75051 1894 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 TCRBV3S1A0A5B6 114 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 LOC730098B7Z3J9 87 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 FXYD1O00168 92 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 IGLV3-1P01715 115 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 RPL38P63173 70 aaKnown RBP2.91□□□□□ -1.94
VMP1-208ENST00000588617 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 DPY30Q9C005 99 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 ANKRD36A6QL64 1941 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 VCANP13611 3396 aa2.91□□□□□ -1.94
VMP1-208ENST00000588617 CEP290O15078 2479 aa2.9□□□□□ -1.95
VMP1-208ENST00000588617 TRAV17A0A0B4J275 112 aa2.9□□□□□ -1.95
VMP1-208ENST00000588617 TMEM30CPA0ZSE6 113 aa2.9□□□□□ -1.95
VMP1-208ENST00000588617 GUCA1AP43080 201 aaPredicted RBP2.9□□□□□ -1.95
VMP1-208ENST00000588617 CGREF1Q99674 301 aa2.9□□□□□ -1.95
VMP1-208ENST00000588617 COL6A3P12111 3177 aa2.9□□□□□ -1.95
VMP1-208ENST00000588617 SPTY2D1-AS1A0A0U1RR47 76 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 A0A1B0GV90 55 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 IGKCP01834 107 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 IFI6P09912 130 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 PYYP10082 97 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 S100A3P33764 101 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 RHOHQ15669 191 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 SPATA45Q537H7 98 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 MIC13Q5XKP0 118 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 COMMD6Q7Z4G1 85 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 SDF2Q99470 211 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 PSMG3Q9BT73 122 aaPredicted RBP2.89□□□□□ -1.95
VMP1-208ENST00000588617 AP4S1Q9Y587 144 aa2.89□□□□□ -1.95
VMP1-208ENST00000588617 DNAH14Q0VDD8 3507 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 IGF2P01344 180 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 TNFP01375 233 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
VMP1-208ENST00000588617 SCIMPQ6UWF3 145 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 UNQ5815/PRO19632Q6UWF5 114 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 Q6ZUT4 128 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 Q9H521 79 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 BOKQ9UMX3 212 aaPredicted RBP2.88□□□□□ -1.95
VMP1-208ENST00000588617 MYO15AQ9UKN7 3530 aa2.88□□□□□ -1.95
VMP1-208ENST00000588617 ATG2AQ2TAZ0 1938 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 LAMA1P25391 3075 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 OCIAD2Q56VL3 154 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 DYNLRB2Q8TF09 96 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 LCN9Q8WX39 176 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 MYO7AQ13402 2215 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 PRRC2BQ5JSZ5 2229 aaKnown RBP2.87□□□□□ -1.95
VMP1-208ENST00000588617 A0A0C4DFX4 3053 aa2.87□□□□□ -1.95
VMP1-208ENST00000588617 DMDP11532 3685 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 FRYLO94915 3013 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 PDE6GP18545 87 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 IQCJQ1A5X6 159 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 SLC48A1Q6P1K1 146 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
VMP1-208ENST00000588617 MED13Q9UHV7 2174 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 F5P12259 2224 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 NUPR2A6NF83 97 aa2.85□□□□□ -1.95
VMP1-208ENST00000588617 GYPBP06028 91 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms