RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
HDAC5-208ENST00000588419 NIT2Q9NQR4 276 aa8.74□□□□□ -1.01
HDAC5-208ENST00000588419 A0A087WYN8 130 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 TRAV26-2A0A0B4J265 109 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 TEX46H3BTG2 121 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 NTF3P20783 257 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 MED9Q9NWA0 146 aa8.73□□□□□ -1.01
HDAC5-208ENST00000588419 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 F2Z2F3 143 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 SLPIP03973 132 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 TWIST1Q15672 202 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 AMMECR1LQ6DCA0 310 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 PGLYRP4Q96LB8 373 aa8.72□□□□□ -1.01
HDAC5-208ENST00000588419 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.02
HDAC5-208ENST00000588419 PHOX2AO14813 284 aa8.71□□□□□ -1.02
HDAC5-208ENST00000588419 MEF2BQ02080 365 aaPredicted RBP8.71□□□□□ -1.02
HDAC5-208ENST00000588419 CIRBPQ14011 172 aaKnown RBP8.71□□□□□ -1.02
HDAC5-208ENST00000588419 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
HDAC5-208ENST00000588419 Q6ZRU5 148 aa8.71□□□□□ -1.02
HDAC5-208ENST00000588419 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
HDAC5-208ENST00000588419 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
HDAC5-208ENST00000588419 PDE6DO43924 150 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 COX6A2Q02221 97 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
HDAC5-208ENST00000588419 SMIM12Q96EX1 92 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
HDAC5-208ENST00000588419 BCL2P10415 239 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 CTRLP40313 264 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 Q6ZNX1 250 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 GTSF1Q8WW33 167 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
HDAC5-208ENST00000588419 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
HDAC5-208ENST00000588419 TRAV1-1A0A0B4J248 108 aa8.68□□□□□ -1.02
HDAC5-208ENST00000588419 APCSP02743 223 aa8.68□□□□□ -1.02
HDAC5-208ENST00000588419 EIF5AL1Q6IS14 154 aaKnown RBP8.68□□□□□ -1.02
HDAC5-208ENST00000588419 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
HDAC5-208ENST00000588419 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
HDAC5-208ENST00000588419 CHCHD10Q8WYQ3 142 aaPredicted RBP8.68□□□□□ -1.02
HDAC5-208ENST00000588419 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
HDAC5-208ENST00000588419 RPS10P46783 165 aaKnown RBP8.67□□□□□ -1.02
HDAC5-208ENST00000588419 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
HDAC5-208ENST00000588419 PRSS3P2Q8NHM4 247 aa8.67□□□□□ -1.02
HDAC5-208ENST00000588419 NDUFS6O75380 124 aaKnown RBP8.66□□□□□ -1.02
HDAC5-208ENST00000588419 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
HDAC5-208ENST00000588419 STPG4Q8N801 248 aa8.66□□□□□ -1.02
HDAC5-208ENST00000588419 PLAC8Q9NZF1 115 aa8.66□□□□□ -1.02
HDAC5-208ENST00000588419 K7EN84 100 aa8.65□□□□□ -1.02
HDAC5-208ENST00000588419 FGF6P10767 208 aa8.65□□□□□ -1.02
HDAC5-208ENST00000588419 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
HDAC5-208ENST00000588419 XCL1P47992 114 aa8.64□□□□□ -1.03
HDAC5-208ENST00000588419 A0A096LNI7 61 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 NCR2O95944 276 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 PMCHP20382 165 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 CEBPGP53567 150 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
HDAC5-208ENST00000588419 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 BTF3L4Q96K17 158 aa8.63□□□□□ -1.03
HDAC5-208ENST00000588419 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
HDAC5-208ENST00000588419 GATCO43716 136 aaKnown RBP8.62□□□□□ -1.03
HDAC5-208ENST00000588419 FOXI1Q12951 378 aa8.62□□□□□ -1.03
HDAC5-208ENST00000588419 ODF1Q14990 250 aa8.62□□□□□ -1.03
HDAC5-208ENST00000588419 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
HDAC5-208ENST00000588419 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
HDAC5-208ENST00000588419 CCL25O15444 150 aa8.61□□□□□ -1.03
HDAC5-208ENST00000588419 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
HDAC5-208ENST00000588419 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
HDAC5-208ENST00000588419 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
HDAC5-208ENST00000588419 TNXBP22105 4242 aa8.61□□□□□ -1.03
HDAC5-208ENST00000588419 H7C423 109 aa8.6□□□□□ -1.03
HDAC5-208ENST00000588419 I3L3M4 83 aa8.6□□□□□ -1.03
HDAC5-208ENST00000588419 SLC51BQ86UW2 128 aa8.6□□□□□ -1.03
HDAC5-208ENST00000588419 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
HDAC5-208ENST00000588419 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
HDAC5-208ENST00000588419 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
HDAC5-208ENST00000588419 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
HDAC5-208ENST00000588419 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
HDAC5-208ENST00000588419 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
HDAC5-208ENST00000588419 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
HDAC5-208ENST00000588419 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
HDAC5-208ENST00000588419 SS18Q15532 418 aa8.58□□□□□ -1.04
HDAC5-208ENST00000588419 ST20Q9HBF5 79 aa8.58□□□□□ -1.04
HDAC5-208ENST00000588419 FAM231BA6NCW3 169 aa8.57□□□□□ -1.04
HDAC5-208ENST00000588419 A8MWL6 223 aa8.57□□□□□ -1.04
HDAC5-208ENST00000588419 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
HDAC5-208ENST00000588419 TSHBP01222 138 aa8.57□□□□□ -1.04
HDAC5-208ENST00000588419 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
HDAC5-208ENST00000588419 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms