RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 REG3AQ06141 175 aa8.56□□□□□ -1.04
H3F3B-205ENST00000587171 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
H3F3B-205ENST00000587171 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
H3F3B-205ENST00000587171 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 A8MWL6 223 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 GATCO43716 136 aaKnown RBP8.55□□□□□ -1.04
H3F3B-205ENST00000587171 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
H3F3B-205ENST00000587171 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
H3F3B-205ENST00000587171 PRSS1P07477 247 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 COTL1Q14019 142 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
H3F3B-205ENST00000587171 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
H3F3B-205ENST00000587171 CT83Q5H943 113 aa8.54□□□□□ -1.04
H3F3B-205ENST00000587171 DGAT2L7PQ6IED9 249 aa8.54□□□□□ -1.04
H3F3B-205ENST00000587171 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
H3F3B-205ENST00000587171 GFRA4Q9GZZ7 299 aa8.54□□□□□ -1.04
H3F3B-205ENST00000587171 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 UBE2L6O14933 153 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 AMTP48728 403 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 CEBPGP53567 150 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 FOXA3P55318 350 aaPredicted RBP8.53□□□□□ -1.04
H3F3B-205ENST00000587171 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 FAM210AQ96ND0 272 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
H3F3B-205ENST00000587171 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
H3F3B-205ENST00000587171 TEX261Q6UWH6 196 aa8.52□□□□□ -1.05
H3F3B-205ENST00000587171 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
H3F3B-205ENST00000587171 C9orf163Q8N9P6 203 aa8.52□□□□□ -1.05
H3F3B-205ENST00000587171 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
H3F3B-205ENST00000587171 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
H3F3B-205ENST00000587171 FAT3Q8TDW7 4589 aa8.52□□□□□ -1.05
H3F3B-205ENST00000587171 NCR2O95944 276 aa8.51□□□□□ -1.05
H3F3B-205ENST00000587171 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
H3F3B-205ENST00000587171 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
H3F3B-205ENST00000587171 SRP19P09132 144 aaKnown RBP8.5□□□□□ -1.05
H3F3B-205ENST00000587171 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
H3F3B-205ENST00000587171 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
H3F3B-205ENST00000587171 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 HIGD1CA8MV81 97 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
H3F3B-205ENST00000587171 OSTCQ9NRP0 149 aa8.49□□□□□ -1.05
H3F3B-205ENST00000587171 H7C423 109 aa8.48□□□□□ -1.05
H3F3B-205ENST00000587171 APCSP02743 223 aa8.48□□□□□ -1.05
H3F3B-205ENST00000587171 BORCS7Q96B45 105 aa8.48□□□□□ -1.05
H3F3B-205ENST00000587171 TMEM191AQ9H0A3 160 aa8.48□□□□□ -1.05
H3F3B-205ENST00000587171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-205ENST00000587171 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
H3F3B-205ENST00000587171 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-205ENST00000587171 GAS8-AS1O95177 125 aa8.47□□□□□ -1.05
H3F3B-205ENST00000587171 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
H3F3B-205ENST00000587171 SDIM1Q6ZPB5 146 aa8.47□□□□□ -1.05
H3F3B-205ENST00000587171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
H3F3B-205ENST00000587171 I3L3M4 83 aa8.46□□□□□ -1.06
H3F3B-205ENST00000587171 FGF6P10767 208 aa8.46□□□□□ -1.06
H3F3B-205ENST00000587171 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
H3F3B-205ENST00000587171 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
H3F3B-205ENST00000587171 V9GYV3 84 aa8.46□□□□□ -1.06
H3F3B-205ENST00000587171 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 PANO1I0J062 215 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 SLPIP03973 132 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
H3F3B-205ENST00000587171 PMCHP20382 165 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
H3F3B-205ENST00000587171 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 TRBV27A0A0K0K1C4 114 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 TSHBP01222 138 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 ESDP10768 282 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 RAB4AP20338 218 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 RPS10P46783 165 aaKnown RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 RPL23P62829 140 aaKnown RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 TMEM241Q24JQ0 296 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 AMN1Q8IY45 258 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
H3F3B-205ENST00000587171 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
H3F3B-205ENST00000587171 IGHV3-64A0A075B6Q5 118 aa8.43□□□□□ -1.06
H3F3B-205ENST00000587171 C9JQL5 133 aa8.43□□□□□ -1.06
H3F3B-205ENST00000587171 J3QL48 77 aa8.43□□□□□ -1.06
H3F3B-205ENST00000587171 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
H3F3B-205ENST00000587171 TMEM242Q9NWH2 141 aa8.43□□□□□ -1.06
H3F3B-205ENST00000587171 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
H3F3B-205ENST00000587171 RIGQ13278 110 aa8.42□□□□□ -1.06
H3F3B-205ENST00000587171 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
H3F3B-205ENST00000587171 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
H3F3B-205ENST00000587171 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
H3F3B-205ENST00000587171 NAT8BQ9UHF3 227 aa8.42□□□□□ -1.06
H3F3B-205ENST00000587171 ADIRFQ15847 76 aa8.41□□□□□ -1.06
H3F3B-205ENST00000587171 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms