RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 CEBPGP53567 150 aa11.82□□□□□ -0.52
HMG20B-216ENST00000585900 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
HMG20B-216ENST00000585900 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
HMG20B-216ENST00000585900 PRSS1P07477 247 aa11.81□□□□□ -0.52
HMG20B-216ENST00000585900 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
HMG20B-216ENST00000585900 MYCBP2O75592 4640 aa11.81□□□□□ -0.52
HMG20B-216ENST00000585900 TRAV26-2A0A0B4J265 109 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 A8MWL6 223 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 FAM231DQ6ZW35 169 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
HMG20B-216ENST00000585900 HERC1Q15751 4861 aa11.79□□□□□ -0.52
HMG20B-216ENST00000585900 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
HMG20B-216ENST00000585900 J3QL48 77 aa11.79□□□□□ -0.52
HMG20B-216ENST00000585900 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
HMG20B-216ENST00000585900 GTSF1Q8WW33 167 aa11.79□□□□□ -0.52
HMG20B-216ENST00000585900 EIF5A2Q9GZV4 153 aaKnown RBP11.79□□□□□ -0.52
HMG20B-216ENST00000585900 CT83Q5H943 113 aa11.78□□□□□ -0.52
HMG20B-216ENST00000585900 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
HMG20B-216ENST00000585900 LYPD6BQ8NI32 183 aa11.78□□□□□ -0.52
HMG20B-216ENST00000585900 NCR2O95944 276 aa11.77□□□□□ -0.53
HMG20B-216ENST00000585900 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
HMG20B-216ENST00000585900 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
HMG20B-216ENST00000585900 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.53
HMG20B-216ENST00000585900 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
HMG20B-216ENST00000585900 APCSP02743 223 aa11.76□□□□□ -0.53
HMG20B-216ENST00000585900 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
HMG20B-216ENST00000585900 RPL39LQ96EH5 51 aaKnown RBP11.76□□□□□ -0.53
HMG20B-216ENST00000585900 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
HMG20B-216ENST00000585900 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.74□□□□□ -0.53
HMG20B-216ENST00000585900 NDUFS6O75380 124 aaKnown RBP11.74□□□□□ -0.53
HMG20B-216ENST00000585900 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
HMG20B-216ENST00000585900 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
HMG20B-216ENST00000585900 ZNF727A8MUV8 499 aa11.73□□□□□ -0.53
HMG20B-216ENST00000585900 H7C423 109 aa11.73□□□□□ -0.53
HMG20B-216ENST00000585900 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-216ENST00000585900 CNBPP62633 177 aaKnown RBP11.73□□□□□ -0.53
HMG20B-216ENST00000585900 RNASEKQ6P5S7 137 aaKnown RBP11.73□□□□□ -0.53
HMG20B-216ENST00000585900 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
HMG20B-216ENST00000585900 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
HMG20B-216ENST00000585900 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
HMG20B-216ENST00000585900 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
HMG20B-216ENST00000585900 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
HMG20B-216ENST00000585900 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
HMG20B-216ENST00000585900 HIGD1CA8MV81 97 aa11.71□□□□□ -0.53
HMG20B-216ENST00000585900 PMCHP20382 165 aa11.71□□□□□ -0.53
HMG20B-216ENST00000585900 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
HMG20B-216ENST00000585900 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 I3L3M4 83 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 ZNF25P17030 456 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-216ENST00000585900 RPL37AP61513 92 aaKnown RBP11.7□□□□□ -0.54
HMG20B-216ENST00000585900 BTF3L4Q96K17 158 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 OSTCQ9NRP0 149 aa11.7□□□□□ -0.54
HMG20B-216ENST00000585900 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 KRTAP29-1A8MX34 341 aaPredicted RBP11.69□□□□□ -0.54
HMG20B-216ENST00000585900 FGF6P10767 208 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 SDIM1Q6ZPB5 146 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
HMG20B-216ENST00000585900 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
HMG20B-216ENST00000585900 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
HMG20B-216ENST00000585900 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
HMG20B-216ENST00000585900 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
HMG20B-216ENST00000585900 KRTAP10-4P60372 401 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-216ENST00000585900 RIGQ13278 110 aa11.66□□□□□ -0.54
HMG20B-216ENST00000585900 FAM74A3Q4VXF1 159 aa11.66□□□□□ -0.54
HMG20B-216ENST00000585900 DPH3Q96FX2 82 aa11.66□□□□□ -0.54
HMG20B-216ENST00000585900 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
HMG20B-216ENST00000585900 C15orf56Q8N910 161 aa11.65□□□□□ -0.54
HMG20B-216ENST00000585900 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
HMG20B-216ENST00000585900 PPP1R17O96001 155 aa11.64□□□□□ -0.55
HMG20B-216ENST00000585900 TSHBP01222 138 aa11.64□□□□□ -0.55
HMG20B-216ENST00000585900 TMEM241Q24JQ0 296 aa11.64□□□□□ -0.55
HMG20B-216ENST00000585900 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
HMG20B-216ENST00000585900 V9GYV3 84 aa11.64□□□□□ -0.55
HMG20B-216ENST00000585900 PANO1I0J062 215 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 RAB4AP20338 218 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 CIRBPQ14011 172 aaKnown RBP11.63□□□□□ -0.55
HMG20B-216ENST00000585900 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 ISOC2Q96AB3 205 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
HMG20B-216ENST00000585900 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 GAS8-AS1O95177 125 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 ESDP10768 282 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 FCER1GP30273 86 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
HMG20B-216ENST00000585900 ADIRFQ15847 76 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 NUP35Q8NFH5 326 aa11.62□□□□□ -0.55
HMG20B-216ENST00000585900 OXTP01178 125 aa11.61□□□□□ -0.55
HMG20B-216ENST00000585900 SLPIP03973 132 aa11.61□□□□□ -0.55
HMG20B-216ENST00000585900 XCL1P47992 114 aa11.61□□□□□ -0.55
HMG20B-216ENST00000585900 RPL23P62829 140 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms