RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 TWIST1Q15672 202 aa11.13□□□□□ -0.63
CDC42EP4-206ENST00000581014 Q5VSD8 79 aa11.13□□□□□ -0.63
CDC42EP4-206ENST00000581014 FAM30AQ9NZY2 134 aa11.13□□□□□ -0.63
CDC42EP4-206ENST00000581014 V9GYV3 84 aa11.13□□□□□ -0.63
CDC42EP4-206ENST00000581014 A0A1B0GUV1 79 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 HIGD1CA8MV81 97 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 IFITM2Q01629 132 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 C14orf177Q52M58 125 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
CDC42EP4-206ENST00000581014 SRRM2Q9UQ35 2752 aaKnown RBP11.1□□□□□ -0.63
CDC42EP4-206ENST00000581014 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.1□□□□□ -0.63
CDC42EP4-206ENST00000581014 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
CDC42EP4-206ENST00000581014 HAMPP81172 84 aa11.1□□□□□ -0.63
CDC42EP4-206ENST00000581014 GAGE6Q13070 117 aa11.1□□□□□ -0.63
CDC42EP4-206ENST00000581014 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
CDC42EP4-206ENST00000581014 ADIRFQ15847 76 aa11.09□□□□□ -0.63
CDC42EP4-206ENST00000581014 KRTAP26-1Q6PEX3 210 aa11.09□□□□□ -0.63
CDC42EP4-206ENST00000581014 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
CDC42EP4-206ENST00000581014 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
CDC42EP4-206ENST00000581014 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 NAT8BQ9UHF3 227 aa11.08□□□□□ -0.64
CDC42EP4-206ENST00000581014 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
CDC42EP4-206ENST00000581014 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
CDC42EP4-206ENST00000581014 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
CDC42EP4-206ENST00000581014 COTL1Q14019 142 aa11.06□□□□□ -0.64
CDC42EP4-206ENST00000581014 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
CDC42EP4-206ENST00000581014 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 A0A1B0GW15 77 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 PPP1R2P9O14990 202 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 REG3AQ06141 175 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 RIGQ13278 110 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
CDC42EP4-206ENST00000581014 TRAV26-2A0A0B4J265 109 aa11.04□□□□□ -0.64
CDC42EP4-206ENST00000581014 USP17L23D6RBM5 183 aa11.04□□□□□ -0.64
CDC42EP4-206ENST00000581014 NCR2O95944 276 aa11.04□□□□□ -0.64
CDC42EP4-206ENST00000581014 IGLV4-60A0A075B6I1 120 aa11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 TRBV6-5A0A0K0K1A5 114 aa11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 AMTP48728 403 aa11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 FLG2Q5D862 2391 aaPredicted RBP11.03□□□□□ -0.64
CDC42EP4-206ENST00000581014 HLA-DQA1P01909 254 aa11.02□□□□□ -0.65
CDC42EP4-206ENST00000581014 CLPSL2Q6UWE3 100 aa11.02□□□□□ -0.65
CDC42EP4-206ENST00000581014 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.65
CDC42EP4-206ENST00000581014 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
CDC42EP4-206ENST00000581014 HERC1Q15751 4861 aa11.02□□□□□ -0.65
CDC42EP4-206ENST00000581014 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 H7C423 109 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 UBE2L6O14933 153 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 PRSS1P07477 247 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 CLRN3Q8NCR9 226 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 MRAP2Q96G30 205 aa11.01□□□□□ -0.65
CDC42EP4-206ENST00000581014 MT-ND4LP03901 98 aa11□□□□□ -0.65
CDC42EP4-206ENST00000581014 S100A8P05109 93 aa11□□□□□ -0.65
CDC42EP4-206ENST00000581014 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
CDC42EP4-206ENST00000581014 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 PPP1R17O96001 155 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 RAB4AP20338 218 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 RNF185Q96GF1 192 aa10.99□□□□□ -0.65
CDC42EP4-206ENST00000581014 IGLV10-54A0A075B6I4 117 aa10.98□□□□□ -0.65
CDC42EP4-206ENST00000581014 I3L3M4 83 aa10.98□□□□□ -0.65
CDC42EP4-206ENST00000581014 ATP5L2Q7Z4Y8 100 aa10.98□□□□□ -0.65
CDC42EP4-206ENST00000581014 LINC00862A6NCI5 91 aa10.97□□□□□ -0.65
CDC42EP4-206ENST00000581014 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
CDC42EP4-206ENST00000581014 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
CDC42EP4-206ENST00000581014 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
CDC42EP4-206ENST00000581014 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
CDC42EP4-206ENST00000581014 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 APCSP02743 223 aa10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 AMN1Q8IY45 258 aa10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 SEC11CQ9BY50 192 aa10.96□□□□□ -0.65
CDC42EP4-206ENST00000581014 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 F8W036 122 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 ESDP10768 282 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 HBBP68871 147 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CDC42EP4-206ENST00000581014 FGF6P10767 208 aa10.94□□□□□ -0.66
CDC42EP4-206ENST00000581014 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
CDC42EP4-206ENST00000581014 PMCHP20382 165 aa10.94□□□□□ -0.66
CDC42EP4-206ENST00000581014 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
CDC42EP4-206ENST00000581014 TRBV24-1A0A075B6N3 115 aa10.93□□□□□ -0.66
CDC42EP4-206ENST00000581014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
CDC42EP4-206ENST00000581014 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
CDC42EP4-206ENST00000581014 TSHBP01222 138 aa10.93□□□□□ -0.66
CDC42EP4-206ENST00000581014 CAMPP49913 170 aa10.93□□□□□ -0.66
CDC42EP4-206ENST00000581014 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms