RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 TRBV27A0A0K0K1C4 114 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 PRSS29PA6NIE9 313 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 SCO1O75880 301 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 TNFRSF6BO95407 300 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
CCDC84-209ENST00000580556 TRAPPC1Q9Y5R8 145 aa8.34□□□□□ -1.07
CCDC84-209ENST00000580556 PRSS47A8MTI9 375 aa8.33□□□□□ -1.08
CCDC84-209ENST00000580556 I3L3M4 83 aa8.33□□□□□ -1.08
CCDC84-209ENST00000580556 RTL8CO15255 209 aa8.33□□□□□ -1.08
CCDC84-209ENST00000580556 LELP1Q5T871 98 aa8.33□□□□□ -1.08
CCDC84-209ENST00000580556 LINC00588Q9Y4M8 146 aa8.33□□□□□ -1.08
CCDC84-209ENST00000580556 VCYO14598 125 aa8.32□□□□□ -1.08
CCDC84-209ENST00000580556 NPYP01303 97 aa8.32□□□□□ -1.08
CCDC84-209ENST00000580556 RAB5AP20339 215 aa8.32□□□□□ -1.08
CCDC84-209ENST00000580556 FABP9Q0Z7S8 132 aa8.32□□□□□ -1.08
CCDC84-209ENST00000580556 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
CCDC84-209ENST00000580556 TRBV6-8A0A0A6YYG3 113 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 TCAPO15273 167 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 COTL1Q14019 142 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 IQCJQ1A5X6 159 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 ALKBH7Q9BT30 221 aaPredicted RBP8.31□□□□□ -1.08
CCDC84-209ENST00000580556 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
CCDC84-209ENST00000580556 APOBP04114 4563 aaKnown RBP8.31□□□□□ -1.08
CCDC84-209ENST00000580556 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
CCDC84-209ENST00000580556 M0R2N4 97 aa8.3□□□□□ -1.08
CCDC84-209ENST00000580556 PMCHP20382 165 aa8.3□□□□□ -1.08
CCDC84-209ENST00000580556 KIAA1644Q3SXP7 199 aa8.3□□□□□ -1.08
CCDC84-209ENST00000580556 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
CCDC84-209ENST00000580556 TRBV25-1A0A075B6N4 114 aa8.29□□□□□ -1.08
CCDC84-209ENST00000580556 IGHV1-24A0A0C4DH33 117 aa8.29□□□□□ -1.08
CCDC84-209ENST00000580556 K7EMI3 77 aa8.29□□□□□ -1.08
CCDC84-209ENST00000580556 TSHBP01222 138 aa8.29□□□□□ -1.08
CCDC84-209ENST00000580556 NTM-AS1Q6ZSK4 140 aa8.29□□□□□ -1.08
CCDC84-209ENST00000580556 IGLV2-18A0A075B6J9 118 aa8.28□□□□□ -1.08
CCDC84-209ENST00000580556 K7EP13 123 aa8.28□□□□□ -1.08
CCDC84-209ENST00000580556 AMTP48728 403 aa8.28□□□□□ -1.08
CCDC84-209ENST00000580556 PKIAP61925 76 aa8.28□□□□□ -1.08
CCDC84-209ENST00000580556 Q8N8P6 123 aa8.28□□□□□ -1.08
CCDC84-209ENST00000580556 NXT2Q9NPJ8 142 aaKnown RBP8.28□□□□□ -1.08
CCDC84-209ENST00000580556 H7C423 109 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 SIVA1O15304 175 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 FCER1GP30273 86 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 TMEM243Q9BU79 118 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
CCDC84-209ENST00000580556 LINC01546A6NGU7 62 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 TRGC2P03986 189 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 ESDP10768 282 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 NIT1Q86X76 327 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 WFDC10BQ8IUB3 73 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 C18orf32Q8TCD1 76 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 Q9H8V8 135 aa8.26□□□□□ -1.09
CCDC84-209ENST00000580556 DNAH5Q8TE73 4624 aa8.25□□□□□ -1.09
CCDC84-209ENST00000580556 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
CCDC84-209ENST00000580556 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
CCDC84-209ENST00000580556 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
CCDC84-209ENST00000580556 IFI27P40305 119 aaPredicted RBP8.24□□□□□ -1.09
CCDC84-209ENST00000580556 ORMDL2Q53FV1 153 aa8.24□□□□□ -1.09
CCDC84-209ENST00000580556 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 UBE2L6O14933 153 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 RAB5BP61020 215 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 SMAGPQ0VAQ4 97 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
CCDC84-209ENST00000580556 TRAV9-2A0A087WT02 112 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 A0A087WX48 190 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 ZNF25P17030 456 aaPredicted RBP8.22□□□□□ -1.09
CCDC84-209ENST00000580556 BTF3P20290 206 aaKnown RBP8.22□□□□□ -1.09
CCDC84-209ENST00000580556 G0S2P27469 103 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 Q0VG73 95 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 LAGE3Q14657 143 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 MRPL52Q86TS9 123 aaKnown RBP8.22□□□□□ -1.09
CCDC84-209ENST00000580556 C20orf203Q8NBC4 194 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
CCDC84-209ENST00000580556 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 GAGE6Q13070 117 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 MPV17L2Q567V2 206 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 FA2HQ7L5A8 372 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
CCDC84-209ENST00000580556 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
CCDC84-209ENST00000580556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.2□□□□□ -1.1
CCDC84-209ENST00000580556 IGKV2-29A2NJV5 120 aaPredicted RBP8.2□□□□□ -1.1
CCDC84-209ENST00000580556 TMEM262E9PQX1 116 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 LINC00614P0C842 121 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 FGF6P10767 208 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 RBX1P62877 108 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 Q6ZR54 194 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 CHCHD1Q96BP2 118 aaKnown RBP8.2□□□□□ -1.1
CCDC84-209ENST00000580556 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
CCDC84-209ENST00000580556 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms