RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 TMEM141Q96I45 108 aa3.82□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TIMM17AQ99595 171 aa3.82□□□□□ -1.8
ERVFRD-3-201ENST00000578561 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
ERVFRD-3-201ENST00000578561 KRTAP3-1Q9BYR8 98 aa3.82□□□□□ -1.8
ERVFRD-3-201ENST00000578561 NIPBLQ6KC79 2804 aaeCLIP3.82□□□□□ -1.8
ERVFRD-3-201ENST00000578561 GCN1Q92616 2671 aaKnown RBP3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 IGHV3-73A0A0B4J1V6 119 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TRAV8-6A0A0B4J262 113 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 LINC01549A6NIU2 74 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 C11orf86A6NJI1 115 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 K7EP13 123 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 INSP01308 110 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 IGLV1-51P01701 117 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 ZNF415Q09FC8 603 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 RHOHQ15669 191 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CFAP126Q5VTH2 177 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 C20orf203Q8NBC4 194 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 LINC01587Q99440 93 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CHAC1Q9BUX1 264 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CST9LQ9H4G1 147 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 HECTD1Q9ULT8 2610 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 A8MWV9 139 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 OR11H12B2RN74 326 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 E9PLD3 99 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 I3L3M4 83 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 RS1O15537 224 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 LY6G6DO95868 133 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 FXYD2P54710 66 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PMVKQ15126 192 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 ZNRF2Q8NHG8 242 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 ZNF418Q8TF45 676 aaPredicted RBP3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 SPXQ9BT56 116 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TM2D2Q9BX73 214 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 MRPL16Q9NX20 251 aaKnown RBP3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
ERVFRD-3-201ENST00000578561 SETD2Q9BYW2 2564 aaPredicted RBP3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 WNK1Q9H4A3 2382 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 H3BRM9 83 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 IGHV3-53P01767 116 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 EMP1P54849 157 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 STHQ8IWL8 128 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 Q8N1X5 172 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 RNASE8Q8TDE3 154 aaKnown RBP3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PHLDA1Q8WV24 401 aaPredicted RBP3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PRADC1Q9BSG0 188 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CHCHD7Q9BUK0 85 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 WFDC10AQ9H1F0 79 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 OTOGQ6ZRI0 2925 aa3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 SETXQ7Z333 2677 aaKnown RBP3.8□□□□□ -1.8
ERVFRD-3-201ENST00000578561 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PLAC8L1A1L4L8 177 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 SAP30O75446 220 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PTTG1IPP53801 180 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 SCGB2A2Q13296 93 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 AMMECR1LQ6DCA0 310 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 NFE4Q86UQ8 179 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CEND1Q8N111 149 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PLEKHB2Q96CS7 222 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 AMELXQ99217 191 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 FAM110AQ9BQ89 295 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PYGO1Q9Y3Y4 419 aa3.79□□□□□ -1.8
ERVFRD-3-201ENST00000578561 A6NDN8 102 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 RHODO00212 210 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 GCSHP23434 173 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 VAMP3Q15836 100 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 TAL2Q16559 108 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 PAPPA-AS1Q5QFB9 102 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 CSNK1G2-AS1Q8NCQ2 148 aa3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
ERVFRD-3-201ENST00000578561 NACAE9PAV3 2078 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 HIVEP2P31629 2446 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 IGHV3OR16-12A0A075B7B8 117 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 TMEM223A0PJW6 202 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 H3BUT2 72 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 K7ERJ3 54 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 ZNF22P17026 224 aaPredicted RBP3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 CMC4P56277 68 aaPredicted RBP3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 Q6ZTI0 123 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 NDUFA11Q86Y39 141 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 SPATA3Q8NHX4 192 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 TMEM263Q8WUH6 116 aaKnown RBP3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 ZNF479Q96JC4 524 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 DNAJC30Q96LL9 226 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 TNFRSF18Q9Y5U5 241 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 JMJD1CQ15652 2540 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 NOTCH2Q04721 2471 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 TRGV1A0A0A0MS02 117 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 A0A1B0GWB2 263 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 ZNF815PA8K554 130 aa3.77□□□□□ -1.81
ERVFRD-3-201ENST00000578561 INAFM1C9JVW0 142 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms