RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 C9orf153Q5TBE3 101 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 UBE2DNLQ8IWF7 75 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 SS18L2Q9UHA2 77 aa9.08□□□□□ -0.96
ERBB2-206ENST00000578373 FRYLO94915 3013 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 SOCS3O14543 225 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 IFITM1P13164 125 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 DSPP15924 2871 aaKnown RBP9.07□□□□□ -0.96
ERBB2-206ENST00000578373 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 A8MZ25 164 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 TCL1BO95988 128 aa9.07□□□□□ -0.96
ERBB2-206ENST00000578373 PSCAO43653 123 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 HAMPP81172 84 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
ERBB2-206ENST00000578373 NDUFA11Q86Y39 141 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 Q6ZUT4 128 aa9.06□□□□□ -0.96
ERBB2-206ENST00000578373 MUC4Q99102 2169 aa9.05□□□□□ -0.96
ERBB2-206ENST00000578373 A6NDX4 124 aa9.05□□□□□ -0.96
ERBB2-206ENST00000578373 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
ERBB2-206ENST00000578373 PTPRBP23467 1997 aa9.05□□□□□ -0.96
ERBB2-206ENST00000578373 EDN2P20800 178 aa9.04□□□□□ -0.96
ERBB2-206ENST00000578373 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
ERBB2-206ENST00000578373 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
ERBB2-206ENST00000578373 SPTBN5Q9NRC6 3674 aaKnown RBP9.04□□□□□ -0.96
ERBB2-206ENST00000578373 IGHV4-4A0A075B6R2 117 aa9.04□□□□□ -0.96
ERBB2-206ENST00000578373 K7EMT4 169 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 ADAMTS20P59510 1910 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 TRAV4A0A0B4J268 109 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 CRLF1O75462 422 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 INSL3P51460 131 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 NRACQ8N912 160 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
ERBB2-206ENST00000578373 TRAV13-2A0A0B4J235 113 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 EBI3Q14213 229 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 CDKN2A-AS1Q9UH64 79 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 DEFB113Q30KQ7 82 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 GYPEP15421 78 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 Q9HAA7 133 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 U3KQK5 164 aa9.02□□□□□ -0.97
ERBB2-206ENST00000578373 TRBV7-3A0A075B6L6 115 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 IGKV3D-7A0A0C4DH55 119 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 A0A1W2PPR1 153 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 J3QKU1 62 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 Q6ZTI0 123 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 VSIG2Q96IQ7 327 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 RNASE3P12724 160 aaKnown RBP9.01□□□□□ -0.97
ERBB2-206ENST00000578373 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 ATRQ13535 2644 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 TEX49A0A1B0GTD5 131 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 HIST2H2BCQ6DN03 193 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 CITED2Q99967 270 aaPredicted RBP9.01□□□□□ -0.97
ERBB2-206ENST00000578373 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
ERBB2-206ENST00000578373 SPANXB1Q9NS25 103 aaPredicted RBP9.01□□□□□ -0.97
ERBB2-206ENST00000578373 F8P00451 2351 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 A0A0J9YXY3 114 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 TNFRSF13BO14836 293 aaPredicted RBP9□□□□□ -0.97
ERBB2-206ENST00000578373 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 CLPSL1A2RUU4 121 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 F8WEM9 126 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 APOC4P55056 127 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 NFE4Q86UQ8 179 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
ERBB2-206ENST00000578373 IGHV1-58A0A0C4DH39 117 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 K7EQD1 137 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 Q8N6K4 173 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 FRYQ5TBA9 3013 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 A0A096LNJ9 63 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 K7EQG2 157 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
ERBB2-206ENST00000578373 ZNF22P17026 224 aaPredicted RBP8.99□□□□□ -0.97
ERBB2-206ENST00000578373 LINC00467Q9BRT7 94 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 LGALS9O00182 355 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 FSTL3O95633 263 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 NKAPP1Q8N9T2 125 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 MYO15AQ9UKN7 3530 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 IGHG4P01861 327 aa8.99□□□□□ -0.97
ERBB2-206ENST00000578373 ATP5G1P05496 136 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 SMIM20Q8N5G0 67 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 PIFOQ8TCI5 191 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 HECTD1Q9ULT8 2610 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
ERBB2-206ENST00000578373 HHLA3Q9XRX5 114 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 IGLV4-3A0A075B6K6 122 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 M0QY20 66 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 C18orf65Q6ZTR6 163 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 MAP6D1Q9H9H5 199 aa8.98□□□□□ -0.97
ERBB2-206ENST00000578373 LECT2O14960 151 aa8.97□□□□□ -0.97
ERBB2-206ENST00000578373 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms