RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PMCHP20382 165 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 MIAQ16674 131 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 AMMECR1LQ6DCA0 310 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 KRTAP17-1Q9BYP8 105 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
SMG6-220ENST00000576218 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
SMG6-220ENST00000576218 ENHOQ6UWT2 76 aa10.12□□□□□ -0.79
SMG6-220ENST00000576218 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
SMG6-220ENST00000576218 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
SMG6-220ENST00000576218 NCR2O95944 276 aa10.11□□□□□ -0.79
SMG6-220ENST00000576218 CAMPP49913 170 aa10.11□□□□□ -0.79
SMG6-220ENST00000576218 WFDC2Q14508 124 aa10.11□□□□□ -0.79
SMG6-220ENST00000576218 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 I3L3M4 83 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 S100A8P05109 93 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 RAB4AP20338 218 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 REG3AQ06141 175 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 C14orf177Q52M58 125 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
SMG6-220ENST00000576218 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
SMG6-220ENST00000576218 A0A1B0GW15 77 aa10.09□□□□□ -0.79
SMG6-220ENST00000576218 PPP1R2P9O14990 202 aa10.09□□□□□ -0.79
SMG6-220ENST00000576218 PPP1R17O96001 155 aa10.09□□□□□ -0.79
SMG6-220ENST00000576218 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
SMG6-220ENST00000576218 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
SMG6-220ENST00000576218 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
SMG6-220ENST00000576218 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 FCER1GP30273 86 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 PNRC1Q12796 327 aaPredicted RBP10.08□□□□□ -0.8
SMG6-220ENST00000576218 CLLU1Q5K131 121 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 MRPL54Q6P161 138 aaKnown RBP10.08□□□□□ -0.8
SMG6-220ENST00000576218 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
SMG6-220ENST00000576218 HERC2O95714 4834 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 IGLV4-60A0A075B6I1 120 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 F8W036 122 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 HBBP68871 147 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 TMEM101Q96IK0 257 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
SMG6-220ENST00000576218 DYNC1H1Q14204 4646 aaKnown RBP10.07□□□□□ -0.8
SMG6-220ENST00000576218 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
SMG6-220ENST00000576218 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
SMG6-220ENST00000576218 MT-ND4LP03901 98 aa10.06□□□□□ -0.8
SMG6-220ENST00000576218 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
SMG6-220ENST00000576218 TMEM70Q9BUB7 260 aa10.06□□□□□ -0.8
SMG6-220ENST00000576218 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
SMG6-220ENST00000576218 H7C423 109 aa10.05□□□□□ -0.8
SMG6-220ENST00000576218 CKS2P33552 79 aa10.05□□□□□ -0.8
SMG6-220ENST00000576218 FAM104BQ5XKR9 115 aa10.05□□□□□ -0.8
SMG6-220ENST00000576218 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
SMG6-220ENST00000576218 VCYO14598 125 aa10.04□□□□□ -0.8
SMG6-220ENST00000576218 FGF6P10767 208 aa10.04□□□□□ -0.8
SMG6-220ENST00000576218 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
SMG6-220ENST00000576218 TSHBP01222 138 aa10.03□□□□□ -0.8
SMG6-220ENST00000576218 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
SMG6-220ENST00000576218 SUMO2P61956 95 aaKnown RBP10.03□□□□□ -0.8
SMG6-220ENST00000576218 Q8N1X5 172 aa10.03□□□□□ -0.8
SMG6-220ENST00000576218 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
SMG6-220ENST00000576218 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
SMG6-220ENST00000576218 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 C7orf77A4D0Y5 90 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 LINC00862A6NCI5 91 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 SMAGPQ0VAQ4 97 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 UQCC3Q6UW78 93 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 ATP5L2Q7Z4Y8 100 aa10.02□□□□□ -0.81
SMG6-220ENST00000576218 D6R8Y8 96 aa10.01□□□□□ -0.81
SMG6-220ENST00000576218 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
SMG6-220ENST00000576218 HAMPP81172 84 aa10.01□□□□□ -0.81
SMG6-220ENST00000576218 IFITM2Q01629 132 aa10□□□□□ -0.81
SMG6-220ENST00000576218 LINC01620Q4KN68 170 aa10□□□□□ -0.81
SMG6-220ENST00000576218 NRACQ8N912 160 aa10□□□□□ -0.81
SMG6-220ENST00000576218 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 EPM2AB3EWF7 344 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 XGP55808 180 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
SMG6-220ENST00000576218 TCAPO15273 167 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 PPBPP02775 128 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 COMMD7Q86VX2 200 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 CLRN3Q8NCR9 226 aa9.98□□□□□ -0.81
SMG6-220ENST00000576218 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
SMG6-220ENST00000576218 PRSS1P07477 247 aa9.97□□□□□ -0.81
SMG6-220ENST00000576218 ESDP10768 282 aa9.97□□□□□ -0.81
SMG6-220ENST00000576218 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
SMG6-220ENST00000576218 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SMG6-220ENST00000576218 RYR1P21817 5038 aa9.97□□□□□ -0.81
SMG6-220ENST00000576218 TMEM218A2RU14 115 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 509.1 ms