RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 DEFA6Q01524 100 aa20.7■□□□□ 0.9
CTDNEP1-208ENST00000573600 COTL1Q14019 142 aa20.7■□□□□ 0.9
CTDNEP1-208ENST00000573600 MRPL35Q9NZE8 188 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-208ENST00000573600 F8VRH5 84 aa20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 DEFB130BP0DP73 79 aa20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 DEFB130AP0DP74 79 aa20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 FHL2Q14192 279 aa20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 PHLDA1Q8WV24 401 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 CHTOPQ9Y3Y2 248 aaKnown RBP20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 DAZ4Q86SG3 579 aaKnown RBP20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 DAZ3Q9NR90 486 aaKnown RBP20.67■□□□□ 0.9
CTDNEP1-208ENST00000573600 PLNP26678 52 aa20.66■□□□□ 0.9
CTDNEP1-208ENST00000573600 C14orf144Q96I85 54 aa20.66■□□□□ 0.9
CTDNEP1-208ENST00000573600 IGHV4-28A0A0C4DH34 117 aa20.65■□□□□ 0.9
CTDNEP1-208ENST00000573600 STAB1Q9NY15 2570 aa20.65■□□□□ 0.9
CTDNEP1-208ENST00000573600 IGHV3-38A0A0C4DH36 116 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 UBE2D3P61077 147 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 UBE2D2P62837 147 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 PMVKQ15126 192 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 FAM222AQ5U5X8 452 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 PYGO1Q9Y3Y4 419 aa20.64■□□□□ 0.9
CTDNEP1-208ENST00000573600 PRSS29PA6NIE9 313 aa20.64■□□□□ 0.89
CTDNEP1-208ENST00000573600 PRADC1Q9BSG0 188 aa20.64■□□□□ 0.89
CTDNEP1-208ENST00000573600 CHCHD7Q9BUK0 85 aa20.64■□□□□ 0.89
CTDNEP1-208ENST00000573600 G3V4G9 280 aa20.63■□□□□ 0.89
CTDNEP1-208ENST00000573600 Q8NAQ8 132 aa20.63■□□□□ 0.89
CTDNEP1-208ENST00000573600 GAGE12JA6NER3 117 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 GAGE1Q13065 139 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 GAGE4Q13068 117 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 GAGE5Q13069 117 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 GAGE13Q4V321 117 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 SAMD5Q5TGI4 173 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 STPG4Q8N801 248 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 HHLA3Q9XRX5 114 aa20.62■□□□□ 0.89
CTDNEP1-208ENST00000573600 NPSP0C0P6 89 aa20.61■□□□□ 0.89
CTDNEP1-208ENST00000573600 ANKRD39Q53RE8 183 aa20.61■□□□□ 0.89
CTDNEP1-208ENST00000573600 PAPPA-AS1Q5QFB9 102 aa20.61■□□□□ 0.89
CTDNEP1-208ENST00000573600 CST9LQ9H4G1 147 aa20.59■□□□□ 0.89
CTDNEP1-208ENST00000573600 SLC25A34Q6PIV7 304 aa20.58■□□□□ 0.89
CTDNEP1-208ENST00000573600 HNRNPA3P51991 378 aaKnown RBP20.58■□□□□ 0.88
CTDNEP1-208ENST00000573600 SPANXA1Q9NS26 97 aa20.58■□□□□ 0.88
CTDNEP1-208ENST00000573600 COX8AP10176 69 aa20.57■□□□□ 0.88
CTDNEP1-208ENST00000573600 CRYBA4P53673 196 aa20.57■□□□□ 0.88
CTDNEP1-208ENST00000573600 ZC2HC1BQ5TFG8 222 aa20.57■□□□□ 0.88
CTDNEP1-208ENST00000573600 CMYA5Q8N3K9 4069 aa20.57■□□□□ 0.88
CTDNEP1-208ENST00000573600 IGLV4-3A0A075B6K6 122 aa20.56■□□□□ 0.88
CTDNEP1-208ENST00000573600 DEFB4AO15263 64 aa20.56■□□□□ 0.88
CTDNEP1-208ENST00000573600 GTSF1LQ9H1H1 148 aa20.56■□□□□ 0.88
CTDNEP1-208ENST00000573600 UBE2D4Q9Y2X8 147 aa20.55■□□□□ 0.88
CTDNEP1-208ENST00000573600 LOC100131303A0A0U1RQF7 123 aa20.54■□□□□ 0.88
CTDNEP1-208ENST00000573600 DAD1P61803 113 aa20.54■□□□□ 0.88
CTDNEP1-208ENST00000573600 MRPL52Q86TS9 123 aaKnown RBP20.54■□□□□ 0.88
CTDNEP1-208ENST00000573600 VCX2Q9H322 139 aa20.54■□□□□ 0.88
CTDNEP1-208ENST00000573600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-208ENST00000573600 IGKV2-29A2NJV5 120 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-208ENST00000573600 SPART-AS1P0CW21 52 aa20.53■□□□□ 0.88
CTDNEP1-208ENST00000573600 OPRPNQ99935 248 aaPredicted RBP20.53■□□□□ 0.88
CTDNEP1-208ENST00000573600 PRO0255Q9UI72 69 aa20.53■□□□□ 0.88
CTDNEP1-208ENST00000573600 LINC00694P0DN24 101 aa20.52■□□□□ 0.88
CTDNEP1-208ENST00000573600 TIMM21Q9BVV7 248 aa20.52■□□□□ 0.88
CTDNEP1-208ENST00000573600 MRPS16Q9Y3D3 137 aaKnown RBP20.52■□□□□ 0.88
CTDNEP1-208ENST00000573600 COL6A5A8TX70 2615 aa20.51■□□□□ 0.87
CTDNEP1-208ENST00000573600 TEX48A0A1B0GUV7 120 aa20.51■□□□□ 0.87
CTDNEP1-208ENST00000573600 IGLV4-69A0A075B6H9 119 aa20.5■□□□□ 0.87
CTDNEP1-208ENST00000573600 SMAGPQ0VAQ4 97 aa20.5■□□□□ 0.87
CTDNEP1-208ENST00000573600 NTM-AS1Q6ZSK4 140 aa20.5■□□□□ 0.87
CTDNEP1-208ENST00000573600 CTAG1AP78358 180 aa20.5■□□□□ 0.87
CTDNEP1-208ENST00000573600 AMELXQ99217 191 aa20.5■□□□□ 0.87
CTDNEP1-208ENST00000573600 NMUP48645 174 aa20.49■□□□□ 0.87
CTDNEP1-208ENST00000573600 CELA1Q9UNI1 258 aa20.49■□□□□ 0.87
CTDNEP1-208ENST00000573600 TMEM97Q5BJF2 176 aa20.48■□□□□ 0.87
CTDNEP1-208ENST00000573600 TCTAP57738 103 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 BOD1L2Q8IYS8 172 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 FAM104AQ969W3 186 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 M0R143 59 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 DLEU1O43261 78 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 ATP5G1P05496 136 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 FGF6P10767 208 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 MRPS36P82909 103 aaKnown RBP20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 CEMP1Q6PRD7 247 aaPredicted RBP20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 SBSPONQ8IVN8 264 aa20.47■□□□□ 0.87
CTDNEP1-208ENST00000573600 C11orf86A6NJI1 115 aa20.46■□□□□ 0.87
CTDNEP1-208ENST00000573600 NFE4Q86UQ8 179 aa20.46■□□□□ 0.87
CTDNEP1-208ENST00000573600 GYPEP15421 78 aa20.45■□□□□ 0.86
CTDNEP1-208ENST00000573600 TMEM243Q9BU79 118 aa20.45■□□□□ 0.86
CTDNEP1-208ENST00000573600 TRBV25-1A0A075B6N4 114 aa20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 H7C423 109 aa20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 DGAT2L7PQ6IED9 249 aa20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 MDFIQ99750 246 aa20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 CSDC2Q9Y534 153 aaKnown RBP20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 IGKV2D-26A0A0A0MRZ7 120 aa20.44■□□□□ 0.86
CTDNEP1-208ENST00000573600 PAX4O43316 350 aa20.43■□□□□ 0.86
CTDNEP1-208ENST00000573600 TP73-AS1Q9UF72 201 aa20.43■□□□□ 0.86
CTDNEP1-208ENST00000573600 LBHQ53QV2 105 aaPredicted RBP20.42■□□□□ 0.86
CTDNEP1-208ENST00000573600 SNHG12Q9BXW3 62 aa20.42■□□□□ 0.86
CTDNEP1-208ENST00000573600 UBE2L6O14933 153 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 PCP2Q8IVA1 136 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 C2orf88Q9BSF0 95 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 RETNQ9HD89 108 aa20.41■□□□□ 0.86
CTDNEP1-208ENST00000573600 HERVK_113P61574 105 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms