RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SDHAF1A6NFY7 115 aa13.71□□□□□ -0.21
CHMP6-204ENST00000572778 UBE2L6O14933 153 aa13.71□□□□□ -0.21
CHMP6-204ENST00000572778 GAS8-AS1O95177 125 aa13.71□□□□□ -0.21
CHMP6-204ENST00000572778 BAALCQ8WXS3 180 aa13.71□□□□□ -0.21
CHMP6-204ENST00000572778 WFDC2Q14508 124 aa13.7□□□□□ -0.22
CHMP6-204ENST00000572778 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
CHMP6-204ENST00000572778 C1orf43Q9BWL3 253 aa13.7□□□□□ -0.22
CHMP6-204ENST00000572778 IGLV5-52A0A0A0MRZ9 124 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 TRBV6-5A0A0K0K1A5 114 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 CDK2AP2O75956 126 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 PMCHP20382 165 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 CAMPP49913 170 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 LINC00269Q8N2A0 174 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 ST20Q9HBF5 79 aa13.69□□□□□ -0.22
CHMP6-204ENST00000572778 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
CHMP6-204ENST00000572778 SMKR1H3BMG3 65 aa13.67□□□□□ -0.22
CHMP6-204ENST00000572778 I3L3M4 83 aa13.67□□□□□ -0.22
CHMP6-204ENST00000572778 NCR2O95944 276 aa13.67□□□□□ -0.22
CHMP6-204ENST00000572778 PNRC1Q12796 327 aaPredicted RBP13.67□□□□□ -0.22
CHMP6-204ENST00000572778 MIAQ16674 131 aa13.67□□□□□ -0.22
CHMP6-204ENST00000572778 A0A1B0GW15 77 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 PPP1R2P9O14990 202 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 APCSP02743 223 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 GCSHP23434 173 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
CHMP6-204ENST00000572778 MRPL54Q6P161 138 aaKnown RBP13.66□□□□□ -0.22
CHMP6-204ENST00000572778 C20orf203Q8NBC4 194 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 PRR34Q9NV39 138 aa13.66□□□□□ -0.22
CHMP6-204ENST00000572778 IGLV4-60A0A075B6I1 120 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 A0A1B0GUV1 79 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 KRTAP10-1P60331 282 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 REG3AQ06141 175 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 FAM104BQ5XKR9 115 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 TMEM70Q9BUB7 260 aa13.65□□□□□ -0.22
CHMP6-204ENST00000572778 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.64□□□□□ -0.23
CHMP6-204ENST00000572778 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
CHMP6-204ENST00000572778 APOBP04114 4563 aaKnown RBP13.64□□□□□ -0.23
CHMP6-204ENST00000572778 RYR1P21817 5038 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.63□□□□□ -0.23
CHMP6-204ENST00000572778 IGKV2-29A2NJV5 120 aaPredicted RBP13.63□□□□□ -0.23
CHMP6-204ENST00000572778 MT-ND4LP03901 98 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 S100A8P05109 93 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 HBBP68871 147 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 AMMECR1LQ6DCA0 310 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 TMEM242Q9NWH2 141 aa13.63□□□□□ -0.23
CHMP6-204ENST00000572778 PPP1R17O96001 155 aa13.62□□□□□ -0.23
CHMP6-204ENST00000572778 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
CHMP6-204ENST00000572778 POLR2KP53803 58 aaKnown RBP13.62□□□□□ -0.23
CHMP6-204ENST00000572778 UQCC3Q6UW78 93 aa13.62□□□□□ -0.23
CHMP6-204ENST00000572778 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
CHMP6-204ENST00000572778 IGLV10-54A0A075B6I4 117 aa13.61□□□□□ -0.23
CHMP6-204ENST00000572778 F8W036 122 aa13.61□□□□□ -0.23
CHMP6-204ENST00000572778 TSHBP01222 138 aa13.61□□□□□ -0.23
CHMP6-204ENST00000572778 RNASEKQ6P5S7 137 aaKnown RBP13.61□□□□□ -0.23
CHMP6-204ENST00000572778 NRACQ8N912 160 aa13.61□□□□□ -0.23
CHMP6-204ENST00000572778 HSPG2P98160 4391 aa13.61□□□□□ -0.23
CHMP6-204ENST00000572778 A0A1B0GXF2 115 aa13.6□□□□□ -0.23
CHMP6-204ENST00000572778 H7C423 109 aa13.6□□□□□ -0.23
CHMP6-204ENST00000572778 CKS2P33552 79 aa13.6□□□□□ -0.23
CHMP6-204ENST00000572778 TRBV27A0A0K0K1C4 114 aa13.59□□□□□ -0.23
CHMP6-204ENST00000572778 LINC00862A6NCI5 91 aa13.59□□□□□ -0.23
CHMP6-204ENST00000572778 VCYO14598 125 aa13.59□□□□□ -0.23
CHMP6-204ENST00000572778 FGF6P10767 208 aa13.59□□□□□ -0.23
CHMP6-204ENST00000572778 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
CHMP6-204ENST00000572778 TRAV8-4A0A0B4J246 113 aa13.58□□□□□ -0.24
CHMP6-204ENST00000572778 IGKV3OR2-268A0A0C4DH90 116 aa13.58□□□□□ -0.24
CHMP6-204ENST00000572778 TMEM218A2RU14 115 aa13.58□□□□□ -0.24
CHMP6-204ENST00000572778 ATP5L2Q7Z4Y8 100 aa13.58□□□□□ -0.24
CHMP6-204ENST00000572778 ESDP10768 282 aa13.57□□□□□ -0.24
CHMP6-204ENST00000572778 FCER1GP30273 86 aa13.57□□□□□ -0.24
CHMP6-204ENST00000572778 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
CHMP6-204ENST00000572778 KRTAP26-1Q6PEX3 210 aa13.57□□□□□ -0.24
CHMP6-204ENST00000572778 COMMD7Q86VX2 200 aa13.57□□□□□ -0.24
CHMP6-204ENST00000572778 USP17L23D6RBM5 183 aa13.56□□□□□ -0.24
CHMP6-204ENST00000572778 ADCYAP1P18509 176 aa13.56□□□□□ -0.24
CHMP6-204ENST00000572778 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
CHMP6-204ENST00000572778 BTF3L4Q96K17 158 aa13.56□□□□□ -0.24
CHMP6-204ENST00000572778 D6R8Y8 96 aa13.55□□□□□ -0.24
CHMP6-204ENST00000572778 KIR2DL4Q99706 377 aa13.55□□□□□ -0.24
CHMP6-204ENST00000572778 C7orf77A4D0Y5 90 aa13.54□□□□□ -0.24
CHMP6-204ENST00000572778 TNFRSF6BO95407 300 aa13.54□□□□□ -0.24
CHMP6-204ENST00000572778 ZNF25P17030 456 aaPredicted RBP13.54□□□□□ -0.24
CHMP6-204ENST00000572778 XGP55808 180 aa13.54□□□□□ -0.24
CHMP6-204ENST00000572778 C20orf78Q9BR46 151 aa13.54□□□□□ -0.24
CHMP6-204ENST00000572778 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
CHMP6-204ENST00000572778 OR5A1Q8NGJ0 315 aa13.53□□□□□ -0.24
CHMP6-204ENST00000572778 KRTAP17-1Q9BYP8 105 aa13.53□□□□□ -0.24
CHMP6-204ENST00000572778 PPBPP02775 128 aa13.52□□□□□ -0.25
CHMP6-204ENST00000572778 LINC01620Q4KN68 170 aa13.52□□□□□ -0.25
CHMP6-204ENST00000572778 SEC11CQ9BY50 192 aa13.52□□□□□ -0.25
CHMP6-204ENST00000572778 Q8N1X5 172 aa13.51□□□□□ -0.25
CHMP6-204ENST00000572778 NPYP01303 97 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 PRSS1P07477 247 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 HAMPP81172 84 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 TMEM136Q6ZRR5 245 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 FAM30AQ9NZY2 134 aa13.5□□□□□ -0.25
CHMP6-204ENST00000572778 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
CHMP6-204ENST00000572778 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms