RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
LITAF-211ENST00000572255 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
LITAF-211ENST00000572255 KRTAP29-1A8MX34 341 aaPredicted RBP11.18□□□□□ -0.62
LITAF-211ENST00000572255 AMTP48728 403 aa11.18□□□□□ -0.62
LITAF-211ENST00000572255 COTL1Q14019 142 aa11.18□□□□□ -0.62
LITAF-211ENST00000572255 Q6ZNX1 250 aa11.18□□□□□ -0.62
LITAF-211ENST00000572255 UBE2L6O14933 153 aa11.17□□□□□ -0.62
LITAF-211ENST00000572255 GATD1Q8NB37 220 aa11.17□□□□□ -0.62
LITAF-211ENST00000572255 CLRN3Q8NCR9 226 aa11.17□□□□□ -0.62
LITAF-211ENST00000572255 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
LITAF-211ENST00000572255 AKAP14Q86UN6 197 aa11.16□□□□□ -0.62
LITAF-211ENST00000572255 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
LITAF-211ENST00000572255 TMEM250H0YL14 139 aa11.15□□□□□ -0.62
LITAF-211ENST00000572255 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
LITAF-211ENST00000572255 ALKAL2Q6UX46 152 aa11.15□□□□□ -0.62
LITAF-211ENST00000572255 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
LITAF-211ENST00000572255 SDIM1Q6ZPB5 146 aa11.14□□□□□ -0.63
LITAF-211ENST00000572255 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
LITAF-211ENST00000572255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
LITAF-211ENST00000572255 PANO1I0J062 215 aa11.13□□□□□ -0.63
LITAF-211ENST00000572255 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
LITAF-211ENST00000572255 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
LITAF-211ENST00000572255 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
LITAF-211ENST00000572255 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
LITAF-211ENST00000572255 hCG_2014768A0A024R1R8 64 aa11.12□□□□□ -0.63
LITAF-211ENST00000572255 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
LITAF-211ENST00000572255 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
LITAF-211ENST00000572255 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
LITAF-211ENST00000572255 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
LITAF-211ENST00000572255 A8MWL6 223 aa11.11□□□□□ -0.63
LITAF-211ENST00000572255 CEBPGP53567 150 aa11.11□□□□□ -0.63
LITAF-211ENST00000572255 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
LITAF-211ENST00000572255 NCR2O95944 276 aa11.1□□□□□ -0.63
LITAF-211ENST00000572255 TEX261Q6UWH6 196 aa11.1□□□□□ -0.63
LITAF-211ENST00000572255 IGKV3OR2-268A0A0C4DH90 116 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 APCSP02743 223 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 SLPIP03973 132 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 CT83Q5H943 113 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
LITAF-211ENST00000572255 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
LITAF-211ENST00000572255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
LITAF-211ENST00000572255 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
LITAF-211ENST00000572255 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
LITAF-211ENST00000572255 OXTP01178 125 aa11.08□□□□□ -0.64
LITAF-211ENST00000572255 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
LITAF-211ENST00000572255 PKHD1L1Q86WI1 4243 aa11.08□□□□□ -0.64
LITAF-211ENST00000572255 H7C423 109 aa11.07□□□□□ -0.64
LITAF-211ENST00000572255 CIRBPQ14011 172 aaKnown RBP11.07□□□□□ -0.64
LITAF-211ENST00000572255 RNASEKQ6P5S7 137 aaKnown RBP11.07□□□□□ -0.64
LITAF-211ENST00000572255 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
LITAF-211ENST00000572255 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
LITAF-211ENST00000572255 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
LITAF-211ENST00000572255 FGF6P10767 208 aa11.06□□□□□ -0.64
LITAF-211ENST00000572255 CFAP161Q6P656 301 aa11.06□□□□□ -0.64
LITAF-211ENST00000572255 BORCS7Q96B45 105 aa11.06□□□□□ -0.64
LITAF-211ENST00000572255 EIF5A2Q9GZV4 153 aaKnown RBP11.06□□□□□ -0.64
LITAF-211ENST00000572255 I3L3M4 83 aa11.05□□□□□ -0.64
LITAF-211ENST00000572255 PMCHP20382 165 aa11.05□□□□□ -0.64
LITAF-211ENST00000572255 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
LITAF-211ENST00000572255 LINC01551Q86U37 167 aa11.05□□□□□ -0.64
LITAF-211ENST00000572255 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
LITAF-211ENST00000572255 A0A1B0GUT8 65 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 FAM231BA6NCW3 169 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
LITAF-211ENST00000572255 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 TSKUQ8WUA8 353 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
LITAF-211ENST00000572255 ZNF727A8MUV8 499 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
LITAF-211ENST00000572255 HIGD2BQ4VC39 106 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
LITAF-211ENST00000572255 A0A087WYN8 130 aa11.02□□□□□ -0.65
LITAF-211ENST00000572255 TSHBP01222 138 aa11.02□□□□□ -0.65
LITAF-211ENST00000572255 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
LITAF-211ENST00000572255 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
LITAF-211ENST00000572255 TMEM242Q9NWH2 141 aa11.02□□□□□ -0.65
LITAF-211ENST00000572255 ESDP10768 282 aa11.01□□□□□ -0.65
LITAF-211ENST00000572255 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
LITAF-211ENST00000572255 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
LITAF-211ENST00000572255 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
LITAF-211ENST00000572255 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
LITAF-211ENST00000572255 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
LITAF-211ENST00000572255 RAB4AP20338 218 aa11□□□□□ -0.65
LITAF-211ENST00000572255 FOXI1Q12951 378 aa11□□□□□ -0.65
LITAF-211ENST00000572255 MRAP2Q96G30 205 aa11□□□□□ -0.65
LITAF-211ENST00000572255 POLR2KP53803 58 aaKnown RBP10.99□□□□□ -0.65
LITAF-211ENST00000572255 COX6A2Q02221 97 aa10.99□□□□□ -0.65
LITAF-211ENST00000572255 SERTAD4-AS1Q5TG53 156 aa10.99□□□□□ -0.65
LITAF-211ENST00000572255 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
LITAF-211ENST00000572255 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
LITAF-211ENST00000572255 XCL1P47992 114 aa10.98□□□□□ -0.65
LITAF-211ENST00000572255 PLAC8Q9NZF1 115 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms