RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
MAP1LC3B-208ENST00000570189 REG3AQ06141 175 aa11.09□□□□□ -0.63
MAP1LC3B-208ENST00000570189 TWIST1Q15672 202 aa11.09□□□□□ -0.63
MAP1LC3B-208ENST00000570189 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
MAP1LC3B-208ENST00000570189 PRSS1P07477 247 aa11.08□□□□□ -0.64
MAP1LC3B-208ENST00000570189 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
MAP1LC3B-208ENST00000570189 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
MAP1LC3B-208ENST00000570189 A8MWL6 223 aa11.07□□□□□ -0.64
MAP1LC3B-208ENST00000570189 COTL1Q14019 142 aa11.07□□□□□ -0.64
MAP1LC3B-208ENST00000570189 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
MAP1LC3B-208ENST00000570189 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
MAP1LC3B-208ENST00000570189 NCR2O95944 276 aa11.06□□□□□ -0.64
MAP1LC3B-208ENST00000570189 CIRBP-AS1Q8TBR5 109 aa11.06□□□□□ -0.64
MAP1LC3B-208ENST00000570189 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 KRTAP10-4P60372 401 aaPredicted RBP11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 SMIM15Q7Z3B0 74 aa11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
MAP1LC3B-208ENST00000570189 FAM231BA6NCW3 169 aa11.04□□□□□ -0.64
MAP1LC3B-208ENST00000570189 H7C423 109 aa11.04□□□□□ -0.64
MAP1LC3B-208ENST00000570189 AMTP48728 403 aa11.04□□□□□ -0.64
MAP1LC3B-208ENST00000570189 DEFB104AQ8WTQ1 72 aa11.04□□□□□ -0.64
MAP1LC3B-208ENST00000570189 GFRA4Q9GZZ7 299 aa11.04□□□□□ -0.64
MAP1LC3B-208ENST00000570189 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
MAP1LC3B-208ENST00000570189 UBE2L6O14933 153 aa11.03□□□□□ -0.64
MAP1LC3B-208ENST00000570189 hCG_2014768A0A024R1R8 64 aa11.02□□□□□ -0.65
MAP1LC3B-208ENST00000570189 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
MAP1LC3B-208ENST00000570189 LINC01551Q86U37 167 aa11.02□□□□□ -0.65
MAP1LC3B-208ENST00000570189 SMIM7Q9BQ49 75 aa11.02□□□□□ -0.65
MAP1LC3B-208ENST00000570189 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
MAP1LC3B-208ENST00000570189 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
MAP1LC3B-208ENST00000570189 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
MAP1LC3B-208ENST00000570189 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
MAP1LC3B-208ENST00000570189 SDHAF1A6NFY7 115 aa11□□□□□ -0.65
MAP1LC3B-208ENST00000570189 KRTAP29-1A8MX34 341 aaPredicted RBP11□□□□□ -0.65
MAP1LC3B-208ENST00000570189 EIF5A2Q9GZV4 153 aaKnown RBP11□□□□□ -0.65
MAP1LC3B-208ENST00000570189 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
MAP1LC3B-208ENST00000570189 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
MAP1LC3B-208ENST00000570189 SDIM1Q6ZPB5 146 aa10.99□□□□□ -0.65
MAP1LC3B-208ENST00000570189 TMEM191AQ9H0A3 160 aa10.99□□□□□ -0.65
MAP1LC3B-208ENST00000570189 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 APCSP02743 223 aa10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 BORCS7Q96B45 105 aa10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
MAP1LC3B-208ENST00000570189 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
MAP1LC3B-208ENST00000570189 I3L3M4 83 aa10.97□□□□□ -0.65
MAP1LC3B-208ENST00000570189 FAM74A3Q4VXF1 159 aa10.97□□□□□ -0.65
MAP1LC3B-208ENST00000570189 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
MAP1LC3B-208ENST00000570189 hDV102S1A0JD36 115 aa10.96□□□□□ -0.65
MAP1LC3B-208ENST00000570189 CEBPGP53567 150 aa10.96□□□□□ -0.65
MAP1LC3B-208ENST00000570189 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 SLPIP03973 132 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 ESDP10768 282 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 MRAP2Q96G30 205 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 AP5S1Q9NUS5 200 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 V9GYV3 84 aa10.95□□□□□ -0.66
MAP1LC3B-208ENST00000570189 FGF6P10767 208 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 AMMECR1LQ6DCA0 310 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 ST20Q9HBF5 79 aa10.94□□□□□ -0.66
MAP1LC3B-208ENST00000570189 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 J3QL48 77 aa10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 TSHBP01222 138 aa10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RAB4AP20338 218 aa10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 MRPL52Q86TS9 123 aaKnown RBP10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
MAP1LC3B-208ENST00000570189 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 PANO1I0J062 215 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 OXTP01178 125 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 PMCHP20382 165 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 TMEM241Q24JQ0 296 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
MAP1LC3B-208ENST00000570189 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 GVQW2A0A096LPI5 108 aaPredicted RBP10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 A0A1B0GVG6 124 aa10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 PPP1R17O96001 155 aa10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RNASEKQ6P5S7 137 aaKnown RBP10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RPS10P46783 165 aaKnown RBP10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RPL23P62829 140 aaKnown RBP10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 RIGQ13278 110 aa10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.66
MAP1LC3B-208ENST00000570189 FOXI1Q12951 378 aa10.89□□□□□ -0.67
MAP1LC3B-208ENST00000570189 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms