RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 A0A096LNJ9 63 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 VWA8A3KMH1 1905 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 C5orf56Q8N8D9 126 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 WDR81Q562E7 1941 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 THSD7BQ9C0I4 1608 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 SNURFQ9Y675 71 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 USF3Q68DE3 2245 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 KLLNB2CW77 178 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 Q8IZM0 81 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 WFDC10AQ9H1F0 79 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 CELA1Q9UNI1 258 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 CREBBPQ92793 2442 aa5.31□□□□□ -1.56
CNOT1-216ENST00000569240 PSCAO43653 123 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 BPESC1Q9GZL8 116 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 ZNF318Q5VUA4 2279 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 IGF1P05019 195 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 SMIM11BQ8TCY0 68 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 IGLV2-18A0A075B6J9 118 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 AMELXQ99217 191 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 COL4A4P53420 1690 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-216ENST00000569240 EPOPA6NHQ4 379 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 ODF3BA8MYP8 253 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 Q6ZS46 218 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 IGF2-ASQ6U949 168 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 NOP10Q9NPE3 64 aaKnown RBP5.3□□□□□ -1.56
CNOT1-216ENST00000569240 COL4A3Q01955 1670 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 M0R378 163 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 RITA1Q96K30 269 aa5.3□□□□□ -1.56
CNOT1-216ENST00000569240 K7EQG2 157 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 BRI3O95415 125 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 GYPEP15421 78 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 C6orf99Q4VX62 202 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 SPRNQ5BIV9 151 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 PIP4P1Q86T03 277 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 CRYGDP07320 174 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 LINC00467Q9BRT7 94 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 CEP250Q9BV73 2442 aa5.29□□□□□ -1.56
CNOT1-216ENST00000569240 SPART-AS1P0CW21 52 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 Q8N814 137 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 E7EUB6 86 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 Q8N3U1 123 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 Q8N6K4 173 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 ABCA1O95477 2261 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 C14orf177Q52M58 125 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 DOPEY2Q9Y3R5 2298 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 DEFB105AQ8NG35 78 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 PLXNB3Q9ULL4 1909 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 ARFGEF3Q5TH69 2177 aa5.28□□□□□ -1.56
CNOT1-216ENST00000569240 CD164L2Q6UWJ8 174 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 BRD3OSQ6XYD6 125 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 THADAQ6YHU6 1953 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 TCF20Q9UGU0 1960 aaKnown RBP5.27□□□□□ -1.57
CNOT1-216ENST00000569240 ABCA7Q8IZY2 2146 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 SMCPP49901 116 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-216ENST00000569240 PRB3Q04118 309 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-216ENST00000569240 HIGD2AQ9BW72 106 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 FAM215AQ9Y5M1 114 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 PRB4P10163 310 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-216ENST00000569240 B9D2Q9BPU9 175 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 Q6ZQY7 126 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 DCANP1Q8TF63 244 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 FAM30AQ9NZY2 134 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 MED12Q93074 2177 aa5.27□□□□□ -1.57
CNOT1-216ENST00000569240 LY6G6EA0A0G2JKS1 128 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 RNASE3P12724 160 aaKnown RBP5.26□□□□□ -1.57
CNOT1-216ENST00000569240 UBE2DNLQ8IWF7 75 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 CHCHD7Q9BUK0 85 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 U3KQA8 63 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 CLPSL1A2RUU4 121 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 FBXL19-AS1Q494R0 122 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 BRCA2P51587 3418 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 LINC01600Q96MT4 127 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 IGHV4-28A0A0C4DH34 117 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 SPRY2O43597 315 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 TNRC6BQ9UPQ9 1833 aaKnown RBP5.26□□□□□ -1.57
CNOT1-216ENST00000569240 NCKAP5O14513 1909 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 CCL18P55774 89 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 APRG1Q8IVJ8 170 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 LY6LH3BQJ8 138 aa5.26□□□□□ -1.57
CNOT1-216ENST00000569240 CRIP2P52943 208 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-216ENST00000569240 HCG22E2RYF7 251 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 NHLRC4P0CG21 123 aaPredicted RBP5.25□□□□□ -1.57
CNOT1-216ENST00000569240 IGKV4-1P06312 121 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 ZNF580Q9UK33 172 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 TRBV6-8A0A0A6YYG3 113 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 SIRPDQ9H106 197 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 BEAN1Q3B7T3 259 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 A8MZ25 164 aa5.25□□□□□ -1.57
CNOT1-216ENST00000569240 BRWD3Q6RI45 1802 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 H0Y9J4 135 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 POM121L12Q8N7R1 296 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 TRIOBPQ9H2D6 2365 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 ZNF73O43830 326 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-216ENST00000569240 LINC00846Q9NV44 126 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 MALRD1Q5VYJ5 2156 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 DEFB114Q30KQ6 69 aa5.24□□□□□ -1.57
CNOT1-216ENST00000569240 SMAD5-AS1Q9Y6J3 95 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms