RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 LINC00269Q8N2A0 174 aa7.85□□□□□ -1.15
SNX29-207ENST00000568949 EIF5A2Q9GZV4 153 aaKnown RBP7.85□□□□□ -1.15
SNX29-207ENST00000568949 M0R036 132 aa7.84□□□□□ -1.15
SNX29-207ENST00000568949 SLPIP03973 132 aa7.84□□□□□ -1.15
SNX29-207ENST00000568949 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
SNX29-207ENST00000568949 CENPWQ5EE01 88 aa7.84□□□□□ -1.15
SNX29-207ENST00000568949 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
SNX29-207ENST00000568949 REG3GQ6UW15 175 aa7.83□□□□□ -1.16
SNX29-207ENST00000568949 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
SNX29-207ENST00000568949 SMDT1Q9H4I9 107 aa7.83□□□□□ -1.16
SNX29-207ENST00000568949 TRAV8-4A0A0B4J246 113 aa7.82□□□□□ -1.16
SNX29-207ENST00000568949 P01737 135 aa7.82□□□□□ -1.16
SNX29-207ENST00000568949 GZMBP10144 247 aa7.82□□□□□ -1.16
SNX29-207ENST00000568949 REG3AQ06141 175 aa7.82□□□□□ -1.16
SNX29-207ENST00000568949 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
SNX29-207ENST00000568949 IGLV10-54A0A075B6I4 117 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 TRBV25-1A0A075B6N4 114 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 F2Z2F3 143 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 OR5AL1P0C617 328 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 RAB14P61106 215 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 GAGE6Q13070 117 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 ZNF56Q15929 161 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 GTSF1Q8WW33 167 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 FAM210AQ96ND0 272 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 DERL1Q9BUN8 251 aa7.81□□□□□ -1.16
SNX29-207ENST00000568949 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
SNX29-207ENST00000568949 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
SNX29-207ENST00000568949 SPANXN1Q5VSR9 72 aa7.8□□□□□ -1.16
SNX29-207ENST00000568949 TMSB15BA0A087X1C1 80 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 RAB19A4D1S5 217 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 COX6A2Q02221 97 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 PEA15Q15121 130 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 OR2D3Q8NGH3 330 aa7.79□□□□□ -1.16
SNX29-207ENST00000568949 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
SNX29-207ENST00000568949 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 C19orf71A6NCJ1 209 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 SNAI2O43623 268 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 CACNG7P62955 275 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 MAJINQ3KP22 176 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 C20orf203Q8NBC4 194 aa7.78□□□□□ -1.16
SNX29-207ENST00000568949 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 CEBPGP53567 150 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX29-207ENST00000568949 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 STPG4Q8N801 248 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 FER1L6-AS1Q8NA97 138 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 OR10AG1Q8NH19 301 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
SNX29-207ENST00000568949 TRBV20OR9-2A0A075B6H5 130 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 F5H697 171 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 RPS10P46783 165 aaKnown RBP7.76□□□□□ -1.17
SNX29-207ENST00000568949 FAM231DQ6ZW35 169 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 PRSS3P2Q8NHM4 247 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 OCC1Q8TAD7 63 aa7.76□□□□□ -1.17
SNX29-207ENST00000568949 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 MUC21A0A0G2JKD1 596 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 A8MWL6 223 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 H7C1H1 209 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 CT83Q5H943 113 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 SMIM15Q7Z3B0 74 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 NUDT10Q8NFP7 164 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 BORCS7Q96B45 105 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 NUDT11Q96G61 164 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 TPPP3Q9BW30 176 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
SNX29-207ENST00000568949 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
SNX29-207ENST00000568949 IGLV4-60A0A075B6I1 120 aa7.74□□□□□ -1.17
SNX29-207ENST00000568949 TMEM241Q24JQ0 296 aa7.74□□□□□ -1.17
SNX29-207ENST00000568949 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
SNX29-207ENST00000568949 FAM231BA6NCW3 169 aa7.73□□□□□ -1.17
SNX29-207ENST00000568949 GATCO43716 136 aaKnown RBP7.73□□□□□ -1.17
SNX29-207ENST00000568949 SRP19P09132 144 aaKnown RBP7.73□□□□□ -1.17
SNX29-207ENST00000568949 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
SNX29-207ENST00000568949 Q6ZRP5 223 aa7.73□□□□□ -1.17
SNX29-207ENST00000568949 TMEM243Q9BU79 118 aa7.73□□□□□ -1.17
SNX29-207ENST00000568949 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
SNX29-207ENST00000568949 LINC01551Q86U37 167 aa7.72□□□□□ -1.17
SNX29-207ENST00000568949 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
SNX29-207ENST00000568949 A0A096LNI7 61 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 GAGE12HA6NDE8 117 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 K7EN84 100 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 M0QY20 66 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 HIGD2BQ4VC39 106 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 LYZL1Q6UWQ5 148 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 CNFNQ9BYD5 112 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 RNASE7Q9H1E1 156 aaKnown RBP7.71□□□□□ -1.18
SNX29-207ENST00000568949 OSTCQ9NRP0 149 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
SNX29-207ENST00000568949 LPAP08519 4548 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
SNX29-207ENST00000568949 MUC21A0A140T8X8 626 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 NTF3P20783 257 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 CTRLP40313 264 aa7.7□□□□□ -1.18
SNX29-207ENST00000568949 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms