RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
SPSB3-210ENST00000568416 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
SPSB3-210ENST00000568416 OCC1Q8TAD7 63 aa12.17□□□□□ -0.46
SPSB3-210ENST00000568416 RNASE7Q9H1E1 156 aaKnown RBP12.17□□□□□ -0.46
SPSB3-210ENST00000568416 TWIST1Q15672 202 aa12.16□□□□□ -0.46
SPSB3-210ENST00000568416 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
SPSB3-210ENST00000568416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
SPSB3-210ENST00000568416 AMTP48728 403 aa12.15□□□□□ -0.46
SPSB3-210ENST00000568416 COTL1Q14019 142 aa12.15□□□□□ -0.46
SPSB3-210ENST00000568416 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
SPSB3-210ENST00000568416 PANO1I0J062 215 aa12.14□□□□□ -0.47
SPSB3-210ENST00000568416 CNBPP62633 177 aaKnown RBP12.14□□□□□ -0.47
SPSB3-210ENST00000568416 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
SPSB3-210ENST00000568416 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
SPSB3-210ENST00000568416 UBE2L6O14933 153 aa12.13□□□□□ -0.47
SPSB3-210ENST00000568416 RPL37AP61513 92 aaKnown RBP12.13□□□□□ -0.47
SPSB3-210ENST00000568416 Q6ZNX1 250 aa12.13□□□□□ -0.47
SPSB3-210ENST00000568416 hDV102S1A0JD36 115 aa12.11□□□□□ -0.47
SPSB3-210ENST00000568416 TMEM250H0YL14 139 aa12.11□□□□□ -0.47
SPSB3-210ENST00000568416 OXTP01178 125 aa12.11□□□□□ -0.47
SPSB3-210ENST00000568416 FAT3Q8TDW7 4589 aa12.11□□□□□ -0.47
SPSB3-210ENST00000568416 LRP1Q07954 4544 aaKnown RBP12.1□□□□□ -0.47
SPSB3-210ENST00000568416 SLPIP03973 132 aa12.1□□□□□ -0.47
SPSB3-210ENST00000568416 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
SPSB3-210ENST00000568416 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
SPSB3-210ENST00000568416 FAM231DQ6ZW35 169 aa12.1□□□□□ -0.47
SPSB3-210ENST00000568416 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
SPSB3-210ENST00000568416 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
SPSB3-210ENST00000568416 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
SPSB3-210ENST00000568416 ALKAL2Q6UX46 152 aa12.09□□□□□ -0.47
SPSB3-210ENST00000568416 LYPD6BQ8NI32 183 aa12.09□□□□□ -0.47
SPSB3-210ENST00000568416 PKHD1L1Q86WI1 4243 aa12.09□□□□□ -0.47
SPSB3-210ENST00000568416 NCR2O95944 276 aa12.08□□□□□ -0.48
SPSB3-210ENST00000568416 HNRNPA3P51991 378 aaKnown RBP12.08□□□□□ -0.48
SPSB3-210ENST00000568416 SMIM15Q7Z3B0 74 aa12.08□□□□□ -0.48
SPSB3-210ENST00000568416 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
SPSB3-210ENST00000568416 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
SPSB3-210ENST00000568416 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
SPSB3-210ENST00000568416 AKAP14Q86UN6 197 aa12.07□□□□□ -0.48
SPSB3-210ENST00000568416 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
SPSB3-210ENST00000568416 A8MWL6 223 aa12.06□□□□□ -0.48
SPSB3-210ENST00000568416 H7C423 109 aa12.06□□□□□ -0.48
SPSB3-210ENST00000568416 CT83Q5H943 113 aa12.06□□□□□ -0.48
SPSB3-210ENST00000568416 TEX261Q6UWH6 196 aa12.06□□□□□ -0.48
SPSB3-210ENST00000568416 C15orf56Q8N910 161 aa12.06□□□□□ -0.48
SPSB3-210ENST00000568416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
SPSB3-210ENST00000568416 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
SPSB3-210ENST00000568416 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
SPSB3-210ENST00000568416 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
SPSB3-210ENST00000568416 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
SPSB3-210ENST00000568416 APCSP02743 223 aa12.04□□□□□ -0.48
SPSB3-210ENST00000568416 AMMECR1LQ6DCA0 310 aa12.04□□□□□ -0.48
SPSB3-210ENST00000568416 CFAP161Q6P656 301 aa12.04□□□□□ -0.48
SPSB3-210ENST00000568416 FGF6P10767 208 aa12.03□□□□□ -0.48
SPSB3-210ENST00000568416 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
SPSB3-210ENST00000568416 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
SPSB3-210ENST00000568416 FAM231BA6NCW3 169 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 I3L3M4 83 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 CEBPGP53567 150 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 SPACA4Q8TDM5 124 aa12.02□□□□□ -0.49
SPSB3-210ENST00000568416 CHCHD10Q8WYQ3 142 aaPredicted RBP12.02□□□□□ -0.49
SPSB3-210ENST00000568416 hCG_2014768A0A024R1R8 64 aa12.01□□□□□ -0.49
SPSB3-210ENST00000568416 A0A087WYN8 130 aa12.01□□□□□ -0.49
SPSB3-210ENST00000568416 NDUFS6O75380 124 aaKnown RBP12.01□□□□□ -0.49
SPSB3-210ENST00000568416 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
SPSB3-210ENST00000568416 PMCHP20382 165 aa12.01□□□□□ -0.49
SPSB3-210ENST00000568416 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
SPSB3-210ENST00000568416 ESDP10768 282 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
SPSB3-210ENST00000568416 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 OR5A1Q8NGJ0 315 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 TSKUQ8WUA8 353 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 BORCS7Q96B45 105 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 SMIM7Q9BQ49 75 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
SPSB3-210ENST00000568416 TSHBP01222 138 aa11.99□□□□□ -0.49
SPSB3-210ENST00000568416 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
SPSB3-210ENST00000568416 FOXI1Q12951 378 aa11.99□□□□□ -0.49
SPSB3-210ENST00000568416 DPH3Q96FX2 82 aa11.99□□□□□ -0.49
SPSB3-210ENST00000568416 FAM210AQ96ND0 272 aa11.99□□□□□ -0.49
SPSB3-210ENST00000568416 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
SPSB3-210ENST00000568416 TMEM191AQ9H0A3 160 aa11.99□□□□□ -0.49
SPSB3-210ENST00000568416 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
SPSB3-210ENST00000568416 A0A1B0GUT8 65 aa11.98□□□□□ -0.49
SPSB3-210ENST00000568416 HIGD1CA8MV81 97 aa11.98□□□□□ -0.49
SPSB3-210ENST00000568416 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
SPSB3-210ENST00000568416 OSTCQ9NRP0 149 aa11.98□□□□□ -0.49
SPSB3-210ENST00000568416 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
SPSB3-210ENST00000568416 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
SPSB3-210ENST00000568416 RAB4AP20338 218 aa11.97□□□□□ -0.49
SPSB3-210ENST00000568416 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
SPSB3-210ENST00000568416 COX6A2Q02221 97 aa11.97□□□□□ -0.49
SPSB3-210ENST00000568416 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
SPSB3-210ENST00000568416 TMEM242Q9NWH2 141 aa11.97□□□□□ -0.49
SPSB3-210ENST00000568416 ZNF727A8MUV8 499 aa11.96□□□□□ -0.49
SPSB3-210ENST00000568416 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
SPSB3-210ENST00000568416 TMEM101Q96IK0 257 aa11.96□□□□□ -0.49
SPSB3-210ENST00000568416 LINC00959A0A1B0GUT2 108 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms