RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 KIR2DL5BQ8NHK3 375 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 MRPL35Q9NZE8 188 aaKnown RBP5.05□□□□□ -1.6
SMG1-215ENST00000568239 X6R8D5 127 aa5.05□□□□□ -1.6
SMG1-215ENST00000568239 GAGE12JA6NER3 117 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 K7EQD1 137 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 WIPF1O43516 503 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 GAGE1Q13065 139 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 GAGE4Q13068 117 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 GAGE5Q13069 117 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 GAGE13Q4V321 117 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 OVOL2Q9BRP0 275 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 PGPEP1Q9NXJ5 209 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 TP73-AS1Q9UF72 201 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 IGKCP01834 107 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
SMG1-215ENST00000568239 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
SMG1-215ENST00000568239 TRBV7-3A0A075B6L6 115 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 A0A087WX48 190 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 G3V4G9 280 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 DPM2O94777 84 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 NMUP48645 174 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 RHOHQ15669 191 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 C20orf203Q8NBC4 194 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 BAALCQ8WXS3 180 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 DNAJC30Q96LL9 226 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 OPRPNQ99935 248 aaPredicted RBP5.04□□□□□ -1.6
SMG1-215ENST00000568239 EDA2RQ9HAV5 297 aa5.04□□□□□ -1.6
SMG1-215ENST00000568239 SMIM9A6NGZ8 99 aa5.03□□□□□ -1.6
SMG1-215ENST00000568239 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
SMG1-215ENST00000568239 HNRNPA3P51991 378 aaKnown RBP5.03□□□□□ -1.6
SMG1-215ENST00000568239 FAM222AQ5U5X8 452 aa5.03□□□□□ -1.6
SMG1-215ENST00000568239 MGAM2Q2M2H8 2515 aa5.03□□□□□ -1.6
SMG1-215ENST00000568239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.03□□□□□ -1.6
SMG1-215ENST00000568239 LOC100131303A0A0U1RQF7 123 aa5.03□□□□□ -1.6
SMG1-215ENST00000568239 IGKV2-29A2NJV5 120 aaPredicted RBP5.03□□□□□ -1.6
SMG1-215ENST00000568239 CEMP1Q6PRD7 247 aaPredicted RBP5.03□□□□□ -1.6
SMG1-215ENST00000568239 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 IGIPA6NJ69 53 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 F8VRH5 84 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 BATFQ16520 125 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 TRBV10-1A0A0K0K1A3 114 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
SMG1-215ENST00000568239 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
SMG1-215ENST00000568239 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 PRB2P02812 416 aaPredicted RBP5.01□□□□□ -1.61
SMG1-215ENST00000568239 PMVKQ15126 192 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 SLC25A34Q6PIV7 304 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 TMEM141Q96I45 108 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 TIMM17AQ99595 171 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 PLNP26678 52 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 FHL2Q14192 279 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 PRADC1Q9BSG0 188 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 VCX2Q9H322 139 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 HHLA3Q9XRX5 114 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 NBEAL1Q6ZS30 2694 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 TRBV6-4A0A1B0GX49 114 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 DGAT2L7PQ6IED9 249 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 LINC00528Q8N1L1 170 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 RNF183Q96D59 192 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 CHCHD7Q9BUK0 85 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 CST9LQ9H4G1 147 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 RETNQ9HD89 108 aa5.01□□□□□ -1.61
SMG1-215ENST00000568239 MIFP14174 115 aa5□□□□□ -1.61
SMG1-215ENST00000568239 HTN3P15516 51 aa5□□□□□ -1.61
SMG1-215ENST00000568239 DAD1P61803 113 aa5□□□□□ -1.61
SMG1-215ENST00000568239 EGFEM1PQ0D2K5 195 aa5□□□□□ -1.61
SMG1-215ENST00000568239 DAZ4Q86SG3 579 aaKnown RBP5□□□□□ -1.61
SMG1-215ENST00000568239 DAZ3Q9NR90 486 aaKnown RBP5□□□□□ -1.61
SMG1-215ENST00000568239 IGKV2D-26A0A0A0MRZ7 120 aa5□□□□□ -1.61
SMG1-215ENST00000568239 COX8AP10176 69 aa5□□□□□ -1.61
SMG1-215ENST00000568239 UBE2D3P61077 147 aa5□□□□□ -1.61
SMG1-215ENST00000568239 UBE2D2P62837 147 aa5□□□□□ -1.61
SMG1-215ENST00000568239 PCP2Q8IVA1 136 aa5□□□□□ -1.61
SMG1-215ENST00000568239 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
SMG1-215ENST00000568239 ANK2Q01484 3957 aa5□□□□□ -1.61
SMG1-215ENST00000568239 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 A0A096LPF7 62 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 TRAV8-6A0A0B4J262 113 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 A0A0J9YY99 117 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 M0R143 59 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 TMEM170BQ5T4T1 132 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 Q8NAQ8 132 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 CELA1Q9UNI1 258 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 UBE2L6O14933 153 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 GYPEP15421 78 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 MDFIQ99750 246 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 SNHG12Q9BXW3 62 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 UBE2D4Q9Y2X8 147 aa4.99□□□□□ -1.61
SMG1-215ENST00000568239 SPART-AS1P0CW21 52 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
SMG1-215ENST00000568239 NTM-AS1Q6ZSK4 140 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 IGLV4-69A0A075B6H9 119 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms