RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TMEM141Q96I45 108 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 TIMM17AQ99595 171 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 CELA1Q9UNI1 258 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 CYSLTR1Q9Y271 337 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 PYGO1Q9Y3Y4 419 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-207ENST00000566095 HTN3P15516 51 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 KRTDAPP60985 99 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 FHL2Q14192 279 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 ICOSQ9Y6W8 199 aa6.95□□□□□ -1.3
SF3B3-207ENST00000566095 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 DEFB131BA0A096LNP1 70 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 H7C423 109 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 PKIAP61925 76 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 COTL1Q14019 142 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 MRPL23Q16540 153 aaKnown RBP6.94□□□□□ -1.3
SF3B3-207ENST00000566095 Q8N976 141 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 NEXN-AS1Q8NBZ9 246 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 RPL39LQ96EH5 51 aaKnown RBP6.94□□□□□ -1.3
SF3B3-207ENST00000566095 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
SF3B3-207ENST00000566095 NUDT3O95989 172 aa6.93□□□□□ -1.3
SF3B3-207ENST00000566095 GYPEP15421 78 aa6.93□□□□□ -1.3
SF3B3-207ENST00000566095 C2orf66Q6UXQ4 117 aa6.93□□□□□ -1.3
SF3B3-207ENST00000566095 C20orf203Q8NBC4 194 aa6.93□□□□□ -1.3
SF3B3-207ENST00000566095 ZNRF2Q8NHG8 242 aa6.93□□□□□ -1.3
SF3B3-207ENST00000566095 CSDC2Q9Y534 153 aaKnown RBP6.93□□□□□ -1.3
SF3B3-207ENST00000566095 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
SF3B3-207ENST00000566095 NANOS2P60321 138 aaKnown RBP6.92□□□□□ -1.3
SF3B3-207ENST00000566095 Q6ZTC4 211 aa6.92□□□□□ -1.3
SF3B3-207ENST00000566095 MRPL52Q86TS9 123 aaKnown RBP6.92□□□□□ -1.3
SF3B3-207ENST00000566095 VAMP8Q9BV40 100 aa6.92□□□□□ -1.3
SF3B3-207ENST00000566095 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
SF3B3-207ENST00000566095 NBEAL2Q6ZNJ1 2754 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 GAGE12JA6NER3 117 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 NUPR2A6NF83 97 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 HSBP1L1C9JCN9 74 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 PLNP26678 52 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 TCTAP57738 103 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 UBE2D3P61077 147 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 UBE2D2P62837 147 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 GAGE1Q13065 139 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 GAGE4Q13068 117 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 GAGE5Q13069 117 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 GAGE13Q4V321 117 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
SF3B3-207ENST00000566095 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-207ENST00000566095 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 A0A087WX48 190 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 UBE2L6O14933 153 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 TSHBP01222 138 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 MRPS36P82909 103 aaKnown RBP6.9□□□□□ -1.3
SF3B3-207ENST00000566095 Q6ZN92 141 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 Q6ZSN1 163 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
SF3B3-207ENST00000566095 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 A0A0J9YY99 117 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 F8VRH5 84 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 PRSS1P07477 247 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 P0DMU3 169 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 TIRAPP58753 221 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 ODF1Q14990 250 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 ZNF664Q8N3J9 261 aa6.89□□□□□ -1.31
SF3B3-207ENST00000566095 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-207ENST00000566095 ZNF25P17030 456 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-207ENST00000566095 PMVKQ15126 192 aa6.88□□□□□ -1.31
SF3B3-207ENST00000566095 PMCHL2Q9BQD1 86 aa6.88□□□□□ -1.31
SF3B3-207ENST00000566095 TMEM243Q9BU79 118 aa6.88□□□□□ -1.31
SF3B3-207ENST00000566095 TRAV8-6A0A0B4J262 113 aa6.87□□□□□ -1.31
SF3B3-207ENST00000566095 DLEU1O43261 78 aa6.87□□□□□ -1.31
SF3B3-207ENST00000566095 DPM2O94777 84 aa6.87□□□□□ -1.31
SF3B3-207ENST00000566095 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
SF3B3-207ENST00000566095 VSIG2Q96IQ7 327 aa6.87□□□□□ -1.31
SF3B3-207ENST00000566095 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 IGKCP01834 107 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 SEC11AP67812 179 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-207ENST00000566095 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-207ENST00000566095 AMMECR1LQ6DCA0 310 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 FAM19A3Q7Z5A8 133 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 AMELXQ99217 191 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 UQCR10Q9UDW1 63 aa6.86□□□□□ -1.31
SF3B3-207ENST00000566095 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 LOC100131303A0A0U1RQF7 123 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 IGLL5B9A064 214 aa6.85□□□□□ -1.31
SF3B3-207ENST00000566095 SIVA1O15304 175 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms