RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 A0A1B0GUT8 65 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 IGLC7A0M8Q6 106 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 GRIFINA4D1Z8 144 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 DPRXA6NFQ7 191 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 SLC17A3O00476 420 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 GNG7O60262 68 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 LTAP01374 205 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 IGHV3-7P01780 117 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 PPBPP02775 128 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 TCRAP04437 139 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 GPX1P07203 203 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 ORM2P19652 201 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 NPPCP23582 126 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 WT1-ASQ06250 92 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM97Q5BJF2 176 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 MINOS1Q5TGZ0 78 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 SAMD13Q5VXD3 122 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 MRPL54Q6P161 138 aaKnown RBP2.18□□□□□ -2.06
LINC00560-201ENST00000564593 SMIM15Q7Z3B0 74 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 Q86TA4 180 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 FAM167A-AS1Q96KT0 104 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 VPREB3Q9UKI3 123 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 LAMTOR2Q9Y2Q5 125 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 MRPS16Q9Y3D3 137 aaKnown RBP2.18□□□□□ -2.06
LINC00560-201ENST00000564593 LINC00588Q9Y4M8 146 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 MUC3AQ02505 3323 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 ROS1P08922 2347 aa2.18□□□□□ -2.06
LINC00560-201ENST00000564593 HIVEP2P31629 2446 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 GVINP1Q7Z2Y8 2422 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 TLN1Q9Y490 2541 aaKnown RBP2.17□□□□□ -2.06
LINC00560-201ENST00000564593 ANKRD17O75179 2603 aaKnown RBP2.17□□□□□ -2.06
LINC00560-201ENST00000564593 LINC01549A6NIU2 74 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 LECT2O14960 151 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 LEPROTL1O95214 131 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 HLA-DRB1P01911 266 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 ATP5G1P05496 136 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 CTSGP08311 255 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 CCL3L1P16619 93 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 REG1BP48304 166 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 FXYD3Q14802 87 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 SPATA45Q537H7 98 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 ST6GALNAC3Q8NDV1 305 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 NUP35Q8NFH5 326 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 OR11H6Q8NGC7 330 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 OR10AG1Q8NH19 301 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 C18orf32Q8TCD1 76 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 SLC50A1Q9BRV3 221 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 RNASE7Q9H1E1 156 aaKnown RBP2.17□□□□□ -2.06
LINC00560-201ENST00000564593 CBLN4Q9NTU7 201 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 PTPRQQ9UMZ3 2332 aa2.17□□□□□ -2.06
LINC00560-201ENST00000564593 WNK2Q9Y3S1 2297 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 TRBV19A0A075B6N1 114 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 A0A1B0GV90 55 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 A0A1W2PNM2 257 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 RBAKDNA6NC62 111 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 F2Z2F3 143 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 H3BRN7 92 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 NDUFA3O95167 84 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 TFF1P04155 84 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 IGLC1P0CG04 106 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 PYYP10082 97 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 ZNF22P17026 224 aaPredicted RBP2.16□□□□□ -2.06
LINC00560-201ENST00000564593 HES1Q14469 280 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 Q56UQ5 140 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 FAM201AQ5SY85 155 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 SCGB1D4Q6XE38 83 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 Q6ZRU5 148 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 TCF24Q7RTU0 167 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 AP1S3Q96PC3 154 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 FAM103A1Q9BTL3 118 aaKnown RBP2.16□□□□□ -2.06
LINC00560-201ENST00000564593 RABAC1Q9UI14 185 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 ABCA4P78363 2273 aa2.16□□□□□ -2.06
LINC00560-201ENST00000564593 TEP1Q99973 2627 aaKnown RBP2.15□□□□□ -2.06
LINC00560-201ENST00000564593 TMEM189A5PLL7 270 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 K7EMI3 77 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 PPP1R17O96001 155 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 C3orf79P0CE67 100 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 IGLC2P0DOY2 106 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 IGLC3P0DOY3 106 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 FOXA3P55318 350 aaPredicted RBP2.15□□□□□ -2.06
LINC00560-201ENST00000564593 DAD1P61803 113 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 SEC11AP67812 179 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 HIST1H1AQ02539 215 aaPredicted RBP2.15□□□□□ -2.06
LINC00560-201ENST00000564593 BATFQ16520 125 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 C10orf55Q5SWW7 151 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 GOLT1AQ6ZVE7 132 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 SPATA12Q7Z6I5 190 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 ZNRF2Q8NHG8 242 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 SNHG12Q9BXW3 62 aa2.15□□□□□ -2.06
LINC00560-201ENST00000564593 NXT2Q9NPJ8 142 aaKnown RBP2.15□□□□□ -2.06
LINC00560-201ENST00000564593 MRPL16Q9NX20 251 aaKnown RBP2.15□□□□□ -2.06
LINC00560-201ENST00000564593 SPTBN1Q01082 2364 aaKnown RBP2.15□□□□□ -2.07
LINC00560-201ENST00000564593 FRYLO94915 3013 aa2.15□□□□□ -2.07
LINC00560-201ENST00000564593 FBN3Q75N90 2809 aa2.15□□□□□ -2.07
LINC00560-201ENST00000564593 CEP295Q9C0D2 2601 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms