RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 DEFB130AP0DP74 79 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 Q9HAA7 133 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 DNAH14Q0VDD8 3507 aa9.49□□□□□ -0.89
COMMD4-209ENST00000564068 IGHV4-38-2P0DP08 117 aa9.49□□□□□ -0.89
COMMD4-209ENST00000564068 HAMPP81172 84 aa9.49□□□□□ -0.89
COMMD4-209ENST00000564068 U3KQE9 123 aa9.49□□□□□ -0.89
COMMD4-209ENST00000564068 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
COMMD4-209ENST00000564068 ODF3BA8MYP8 253 aa9.48□□□□□ -0.89
COMMD4-209ENST00000564068 PTPRBP23467 1997 aa9.48□□□□□ -0.89
COMMD4-209ENST00000564068 UBE2D1P51668 147 aa9.48□□□□□ -0.89
COMMD4-209ENST00000564068 ZNF843Q8N446 348 aa9.48□□□□□ -0.89
COMMD4-209ENST00000564068 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
COMMD4-209ENST00000564068 DOPEY1Q5JWR5 2465 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 RNASE3P12724 160 aaKnown RBP9.47□□□□□ -0.89
COMMD4-209ENST00000564068 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 APRG1Q8IVJ8 170 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 PRRC2AP48634 2157 aaKnown RBP9.47□□□□□ -0.89
COMMD4-209ENST00000564068 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
COMMD4-209ENST00000564068 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 MIAQ16674 131 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 SIRPDQ9H106 197 aa9.47□□□□□ -0.89
COMMD4-209ENST00000564068 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 GATA3P23771 443 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 SND1-IT1Q9HBX3 110 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 WDFY4Q6ZS81 3184 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 UBL5Q9BZL1 73 aa9.46□□□□□ -0.89
COMMD4-209ENST00000564068 ADAMTS20P59510 1910 aa9.46□□□□□ -0.9
COMMD4-209ENST00000564068 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.9
COMMD4-209ENST00000564068 IGHV4-61A0A0C4DH41 118 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 LINC01619G3V211 115 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 CDIP1Q9H305 208 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
COMMD4-209ENST00000564068 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 LINC00643Q86TS7 51 aa9.45□□□□□ -0.9
COMMD4-209ENST00000564068 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 ACANP16112 2415 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 VPS13AQ96RL7 3174 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
COMMD4-209ENST00000564068 H3BUA1 57 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
COMMD4-209ENST00000564068 TSPEAR-AS2P59090 65 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 DAZ2Q13117 558 aaKnown RBP9.44□□□□□ -0.9
COMMD4-209ENST00000564068 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
COMMD4-209ENST00000564068 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
COMMD4-209ENST00000564068 CENPEQ02224 2701 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 A0A0J9YX75 114 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 M0QY20 66 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 UBE2D3P61077 147 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 UBE2D2P62837 147 aa9.44□□□□□ -0.9
COMMD4-209ENST00000564068 PROK1P58294 105 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 ATOX1O00244 68 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 LECT2O14960 151 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 NRGNQ92686 78 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
COMMD4-209ENST00000564068 TNFRSF13BO14836 293 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-209ENST00000564068 PF4P02776 101 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 IGIPA6NJ69 53 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 J3KT08 172 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 ATP5G1P05496 136 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 DEFB112Q30KQ8 113 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 C14orf132Q9NPU4 83 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 SS18Q15532 418 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 Q6ZSV7 163 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
COMMD4-209ENST00000564068 A0A096LPF7 62 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 CRLF1O75462 422 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 SLURP1P55000 103 aa9.42□□□□□ -0.9
COMMD4-209ENST00000564068 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 XCL1P47992 114 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 EBI3Q14213 229 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
COMMD4-209ENST00000564068 IGHV4OR15-8A0A075B7B6 117 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 A0A087WW49 117 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 MIR7-3HGQ8N6C7 128 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 LAMA1P25391 3075 aa9.41□□□□□ -0.9
COMMD4-209ENST00000564068 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-209ENST00000564068 IGHG2P01859 326 aa9.4□□□□□ -0.9
COMMD4-209ENST00000564068 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
COMMD4-209ENST00000564068 H7C423 109 aa9.4□□□□□ -0.9
COMMD4-209ENST00000564068 COX7A2LO14548 114 aa9.4□□□□□ -0.9
COMMD4-209ENST00000564068 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.91
COMMD4-209ENST00000564068 IGLV4-69A0A075B6H9 119 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 NSUN5P1Q3KNT7 163 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 ORMDL1Q9P0S3 153 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 PRM2P04554 102 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
COMMD4-209ENST00000564068 K7EMT4 169 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms