RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TRAV26-2A0A0B4J265 109 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 HBDP02042 147 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 LINC01545Q5VT33 79 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 SNHG12Q9BXW3 62 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
SPG7-209ENST00000564047 A0A096LNJ9 63 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 F5H768 121 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 SMKR1H3BMG3 65 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 K7EQD1 137 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 EREGO14944 169 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 NCR2O95944 276 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 PPP1R17O96001 155 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 HTN3P15516 51 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 CRYBA4P53673 196 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 RHOHQ15669 191 aa9.07□□□□□ -0.96
SPG7-209ENST00000564047 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 TRAV10A0A0B4J240 114 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 LGALS9CQ6DKI2 356 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 Q8N8P6 123 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 PRADC1Q9BSG0 188 aa9.06□□□□□ -0.96
SPG7-209ENST00000564047 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
SPG7-209ENST00000564047 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
SPG7-209ENST00000564047 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
SPG7-209ENST00000564047 HSBP1L1C9JCN9 74 aa9.05□□□□□ -0.96
SPG7-209ENST00000564047 HNRNPA3P51991 378 aaKnown RBP9.05□□□□□ -0.96
SPG7-209ENST00000564047 ATOH7Q8N100 152 aa9.05□□□□□ -0.96
SPG7-209ENST00000564047 NRACQ8N912 160 aa9.05□□□□□ -0.96
SPG7-209ENST00000564047 PAX4O43316 350 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 P0DMU3 169 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 FCER1GP30273 86 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
SPG7-209ENST00000564047 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
SPG7-209ENST00000564047 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 H3BNG1 76 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 RPL36AP83881 106 aaKnown RBP9.03□□□□□ -0.96
SPG7-209ENST00000564047 Q6ZN92 141 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 PHLDA1Q8WV24 401 aaPredicted RBP9.03□□□□□ -0.96
SPG7-209ENST00000564047 RPL36ALQ969Q0 106 aaKnown RBP9.03□□□□□ -0.96
SPG7-209ENST00000564047 VSIG2Q96IQ7 327 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 Q9UF83 564 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 NACAE9PAV3 2078 aa9.03□□□□□ -0.96
SPG7-209ENST00000564047 TRBV7-3A0A075B6L6 115 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 A0A0J9YY99 117 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 A0A1B0GV90 55 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 K7EMI3 77 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 GYPEP15421 78 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
SPG7-209ENST00000564047 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.97
SPG7-209ENST00000564047 LOC100131303A0A0U1RQF7 123 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 RPL32P62910 135 aaKnown RBP9.01□□□□□ -0.97
SPG7-209ENST00000564047 GAGE1Q13065 139 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 GAGE4Q13068 117 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 GAGE5Q13069 117 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 GAGE13Q4V321 117 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
SPG7-209ENST00000564047 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
SPG7-209ENST00000564047 LINC00694P0DN24 101 aa9□□□□□ -0.97
SPG7-209ENST00000564047 POLR2KP53803 58 aaKnown RBP9□□□□□ -0.97
SPG7-209ENST00000564047 UBE2D3P61077 147 aa9□□□□□ -0.97
SPG7-209ENST00000564047 UBE2D2P62837 147 aa9□□□□□ -0.97
SPG7-209ENST00000564047 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
SPG7-209ENST00000564047 hDV102S1A0JD36 115 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 VCYO14598 125 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 ATP5LO75964 103 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 LAGE3Q14657 143 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
SPG7-209ENST00000564047 SLC25A34Q6PIV7 304 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 DAZ4Q86SG3 579 aaKnown RBP8.99□□□□□ -0.97
SPG7-209ENST00000564047 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 DAZ3Q9NR90 486 aaKnown RBP8.99□□□□□ -0.97
SPG7-209ENST00000564047 ICOSQ9Y6W8 199 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 RYR1P21817 5038 aa8.99□□□□□ -0.97
SPG7-209ENST00000564047 PCLOQ9Y6V0 5065 aa8.98□□□□□ -0.97
SPG7-209ENST00000564047 TRBV27A0A0K0K1C4 114 aa8.98□□□□□ -0.97
SPG7-209ENST00000564047 COL5A1-AS1Q5SY13 56 aa8.98□□□□□ -0.97
SPG7-209ENST00000564047 CEMP1Q6PRD7 247 aaPredicted RBP8.98□□□□□ -0.97
SPG7-209ENST00000564047 SH2D6Q7Z4S9 175 aa8.98□□□□□ -0.97
SPG7-209ENST00000564047 HERC2O95714 4834 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 A0A096LPF7 62 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 NUPR2A6NF83 97 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 H0Y8G0 127 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 I3L3M4 83 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 COX8AP10176 69 aa8.97□□□□□ -0.97
SPG7-209ENST00000564047 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms