RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 MRPS16Q9Y3D3 137 aaKnown RBP18.49■□□□□ 0.55
SH3GL3-205ENST00000563901 URB1-AS1Q96HZ7 61 aa18.49■□□□□ 0.55
SH3GL3-205ENST00000563901 IGHV1-24A0A0C4DH33 117 aa18.48■□□□□ 0.55
SH3GL3-205ENST00000563901 CHCHD7Q9BUK0 85 aa18.48■□□□□ 0.55
SH3GL3-205ENST00000563901 TRBV25-1A0A075B6N4 114 aa18.47■□□□□ 0.55
SH3GL3-205ENST00000563901 Q8N3U1 123 aa18.47■□□□□ 0.55
SH3GL3-205ENST00000563901 NXT2Q9NPJ8 142 aaKnown RBP18.47■□□□□ 0.55
SH3GL3-205ENST00000563901 VPS13DQ5THJ4 4388 aa18.47■□□□□ 0.55
SH3GL3-205ENST00000563901 DNAH1Q9P2D7 4330 aa18.47■□□□□ 0.55
SH3GL3-205ENST00000563901 TMEM97Q5BJF2 176 aa18.46■□□□□ 0.55
SH3GL3-205ENST00000563901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 IGKV2-29A2NJV5 120 aaPredicted RBP18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BKO60814 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BJP06899 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BOP23527 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BBP33778 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BDP58876 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BCP62807 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST2H2BEQ16778 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BHQ93079 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BNQ99877 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 HIST1H2BMQ99879 126 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 CHCHD5Q9BSY4 110 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 ALMS1Q8TCU4 4167 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 RAB5BP61020 215 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 TMEM243Q9BU79 118 aa18.45■□□□□ 0.54
SH3GL3-205ENST00000563901 TRAV8-6A0A0B4J262 113 aa18.44■□□□□ 0.54
SH3GL3-205ENST00000563901 GAGE6Q13070 117 aa18.44■□□□□ 0.54
SH3GL3-205ENST00000563901 LY6G6CO95867 125 aa18.43■□□□□ 0.54
SH3GL3-205ENST00000563901 ESDP10768 282 aa18.43■□□□□ 0.54
SH3GL3-205ENST00000563901 FA2HQ7L5A8 372 aa18.43■□□□□ 0.54
SH3GL3-205ENST00000563901 NIT1Q86X76 327 aa18.43■□□□□ 0.54
SH3GL3-205ENST00000563901 LINC00476Q8WZB0 136 aa18.43■□□□□ 0.54
SH3GL3-205ENST00000563901 LGALS9CQ6DKI2 356 aa18.42■□□□□ 0.54
SH3GL3-205ENST00000563901 RNASEKQ6P5S7 137 aaKnown RBP18.42■□□□□ 0.54
SH3GL3-205ENST00000563901 UPK3BQ9BT76 320 aa18.42■□□□□ 0.54
SH3GL3-205ENST00000563901 Q0VG73 95 aa18.41■□□□□ 0.54
SH3GL3-205ENST00000563901 BAGE3Q86Y29 109 aa18.41■□□□□ 0.54
SH3GL3-205ENST00000563901 RPL39P62891 51 aaKnown RBP18.4■□□□□ 0.54
SH3GL3-205ENST00000563901 LAGE3Q14657 143 aa18.4■□□□□ 0.54
SH3GL3-205ENST00000563901 TMEM262E9PQX1 116 aa18.39■□□□□ 0.53
SH3GL3-205ENST00000563901 LINC00614P0C842 121 aa18.39■□□□□ 0.53
SH3GL3-205ENST00000563901 LINC01546A6NGU7 62 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 SIVA1O15304 175 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 IGHV3-30P01768 117 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 IGHV3-33P01772 117 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 IGHV3-30-3P0DP02 117 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 IGHV3-30-5P0DP03 117 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 LINC00310P59036 64 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 Q9H8V8 135 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 UBE2L6O14933 153 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 PMCHL1Q16048 86 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 MPV17L2Q567V2 206 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 C20orf203Q8NBC4 194 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 AP5S1Q9NUS5 200 aa18.38■□□□□ 0.53
SH3GL3-205ENST00000563901 SERF1AO75920 110 aa18.36■□□□□ 0.53
SH3GL3-205ENST00000563901 ORMDL2Q53FV1 153 aa18.36■□□□□ 0.53
SH3GL3-205ENST00000563901 Q8N976 141 aa18.36■□□□□ 0.53
SH3GL3-205ENST00000563901 K7EMI3 77 aa18.34■□□□□ 0.53
SH3GL3-205ENST00000563901 NUPR1O60356 82 aa18.34■□□□□ 0.53
SH3GL3-205ENST00000563901 BTF3P20290 206 aaKnown RBP18.34■□□□□ 0.53
SH3GL3-205ENST00000563901 FGF6P10767 208 aa18.34■□□□□ 0.53
SH3GL3-205ENST00000563901 DNAH10OSP0CZ25 163 aa18.33■□□□□ 0.52
SH3GL3-205ENST00000563901 A0A087WX48 190 aa18.32■□□□□ 0.52
SH3GL3-205ENST00000563901 RBX1P62877 108 aa18.32■□□□□ 0.52
SH3GL3-205ENST00000563901 C2orf66Q6UXQ4 117 aa18.32■□□□□ 0.52
SH3GL3-205ENST00000563901 IGLV4-60A0A075B6I1 120 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 A0A096LNJ9 63 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 LINC01556Q5JQF7 62 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 CHCHD1Q96BP2 118 aaKnown RBP18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 NDUFA6P56556 154 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 AMMECR1LQ6DCA0 310 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 UBE2D4Q9Y2X8 147 aa18.31■□□□□ 0.52
SH3GL3-205ENST00000563901 KRTAP1-5Q9BYS1 174 aa18.3■□□□□ 0.52
SH3GL3-205ENST00000563901 KMT2AQ03164 3969 aa18.29■□□□□ 0.52
SH3GL3-205ENST00000563901 H7C423 109 aa18.29■□□□□ 0.52
SH3GL3-205ENST00000563901 FAM19A2Q8N3H0 131 aa18.29■□□□□ 0.52
SH3GL3-205ENST00000563901 CYSLTR1Q9Y271 337 aa18.29■□□□□ 0.52
SH3GL3-205ENST00000563901 S100A6P06703 90 aa18.28■□□□□ 0.52
SH3GL3-205ENST00000563901 HSBP1O75506 76 aa18.27■□□□□ 0.52
SH3GL3-205ENST00000563901 TMEM18Q96B42 140 aa18.27■□□□□ 0.52
SH3GL3-205ENST00000563901 OPRPNQ99935 248 aaPredicted RBP18.27■□□□□ 0.52
SH3GL3-205ENST00000563901 LCE6AA0A183 80 aa18.27■□□□□ 0.51
SH3GL3-205ENST00000563901 M0R2N4 97 aa18.27■□□□□ 0.51
SH3GL3-205ENST00000563901 TOMM6Q96B49 74 aa18.27■□□□□ 0.51
SH3GL3-205ENST00000563901 SACSQ9NZJ4 4579 aa18.26■□□□□ 0.51
SH3GL3-205ENST00000563901 RNASE13Q5GAN3 156 aaKnown RBP18.26■□□□□ 0.51
SH3GL3-205ENST00000563901 MRPL52Q86TS9 123 aaKnown RBP18.26■□□□□ 0.51
SH3GL3-205ENST00000563901 KLK12Q9UKR0 248 aa18.26■□□□□ 0.51
SH3GL3-205ENST00000563901 A0A1B0GUV1 79 aa18.25■□□□□ 0.51
SH3GL3-205ENST00000563901 ANGP03950 147 aaKnown RBP18.25■□□□□ 0.51
SH3GL3-205ENST00000563901 CLPSL2Q6UWE3 100 aa18.25■□□□□ 0.51
SH3GL3-205ENST00000563901 FAM104AQ969W3 186 aa18.25■□□□□ 0.51
SH3GL3-205ENST00000563901 HBDP02042 147 aa18.24■□□□□ 0.51
SH3GL3-205ENST00000563901 PKIAP61925 76 aa18.24■□□□□ 0.51
SH3GL3-205ENST00000563901 HYDINQ4G0P3 5121 aa18.24■□□□□ 0.51
SH3GL3-205ENST00000563901 NBDYA0A0U1RRE5 68 aa18.23■□□□□ 0.51
SH3GL3-205ENST00000563901 Q6ZUT4 128 aa18.23■□□□□ 0.51
SH3GL3-205ENST00000563901 OR5A1Q8NGJ0 315 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms