RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 RPS20P60866 119 aaKnown RBP11.74□□□□□ -0.53
NME3-204ENST00000563498 COX6A2Q02221 97 aa11.74□□□□□ -0.53
NME3-204ENST00000563498 KCNRGQ8N5I3 272 aa11.74□□□□□ -0.53
NME3-204ENST00000563498 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
NME3-204ENST00000563498 NIT2Q9NQR4 276 aa11.74□□□□□ -0.53
NME3-204ENST00000563498 A0A1B0GV50 99 aa11.73□□□□□ -0.53
NME3-204ENST00000563498 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
NME3-204ENST00000563498 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
NME3-204ENST00000563498 F2Z2F3 143 aa11.72□□□□□ -0.53
NME3-204ENST00000563498 GTSF1Q8WW33 167 aa11.72□□□□□ -0.53
NME3-204ENST00000563498 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 AMTP48728 403 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 COTL1Q14019 142 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 ZNF345Q14585 488 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 MAJINQ3KP22 176 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 C11orf52Q96A22 123 aa11.71□□□□□ -0.53
NME3-204ENST00000563498 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
NME3-204ENST00000563498 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
NME3-204ENST00000563498 H2AFB1P0C5Y9 115 aa11.7□□□□□ -0.54
NME3-204ENST00000563498 GVQW2A0A096LPI5 108 aaPredicted RBP11.69□□□□□ -0.54
NME3-204ENST00000563498 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
NME3-204ENST00000563498 XKRY2A2RUG3 117 aa11.69□□□□□ -0.54
NME3-204ENST00000563498 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
NME3-204ENST00000563498 STPG4Q8N801 248 aa11.69□□□□□ -0.54
NME3-204ENST00000563498 SMIM12Q96EX1 92 aa11.69□□□□□ -0.54
NME3-204ENST00000563498 HIGD2BQ4VC39 106 aa11.68□□□□□ -0.54
NME3-204ENST00000563498 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
NME3-204ENST00000563498 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
NME3-204ENST00000563498 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
NME3-204ENST00000563498 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
NME3-204ENST00000563498 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
NME3-204ENST00000563498 NTF3P20783 257 aa11.66□□□□□ -0.54
NME3-204ENST00000563498 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
NME3-204ENST00000563498 LYZL1Q6UWQ5 148 aa11.66□□□□□ -0.54
NME3-204ENST00000563498 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
NME3-204ENST00000563498 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
NME3-204ENST00000563498 IFNA1P01562 189 aa11.65□□□□□ -0.54
NME3-204ENST00000563498 CCL20P78556 96 aa11.65□□□□□ -0.54
NME3-204ENST00000563498 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
NME3-204ENST00000563498 LYPD6BQ8NI32 183 aa11.65□□□□□ -0.54
NME3-204ENST00000563498 A0A096LNI7 61 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 H7C423 109 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 NCR2O95944 276 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 GNG4P50150 75 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 ODF1Q14990 250 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 GNG13Q9P2W3 67 aa11.64□□□□□ -0.55
NME3-204ENST00000563498 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
NME3-204ENST00000563498 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
NME3-204ENST00000563498 CTRLP40313 264 aa11.63□□□□□ -0.55
NME3-204ENST00000563498 CNFNQ9BYD5 112 aa11.63□□□□□ -0.55
NME3-204ENST00000563498 BIN3Q9NQY0 253 aa11.63□□□□□ -0.55
NME3-204ENST00000563498 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
NME3-204ENST00000563498 BCL2L11O43521 198 aa11.62□□□□□ -0.55
NME3-204ENST00000563498 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
NME3-204ENST00000563498 FOXI1Q12951 378 aa11.62□□□□□ -0.55
NME3-204ENST00000563498 GATD1Q8NB37 220 aa11.62□□□□□ -0.55
NME3-204ENST00000563498 KANTRA0A1W2PQU2 76 aa11.61□□□□□ -0.55
NME3-204ENST00000563498 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
NME3-204ENST00000563498 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
NME3-204ENST00000563498 TWIST1Q15672 202 aa11.6□□□□□ -0.55
NME3-204ENST00000563498 RNASEKQ6P5S7 137 aaKnown RBP11.6□□□□□ -0.55
NME3-204ENST00000563498 Q6ZRP5 223 aa11.6□□□□□ -0.55
NME3-204ENST00000563498 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
NME3-204ENST00000563498 PDE6DO43924 150 aa11.59□□□□□ -0.55
NME3-204ENST00000563498 APCSP02743 223 aa11.59□□□□□ -0.55
NME3-204ENST00000563498 FGF6P10767 208 aa11.59□□□□□ -0.55
NME3-204ENST00000563498 ZNF25P17030 456 aaPredicted RBP11.59□□□□□ -0.55
NME3-204ENST00000563498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.58□□□□□ -0.56
NME3-204ENST00000563498 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
NME3-204ENST00000563498 IGKV2-29A2NJV5 120 aaPredicted RBP11.58□□□□□ -0.56
NME3-204ENST00000563498 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
NME3-204ENST00000563498 SLC7A5P1Q8MH63 180 aa11.58□□□□□ -0.56
NME3-204ENST00000563498 OR5A1Q8NGJ0 315 aa11.58□□□□□ -0.56
NME3-204ENST00000563498 IGHV1-58A0A0C4DH39 117 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 TEX46H3BTG2 121 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 TEX261Q6UWH6 196 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 CARD19Q96LW7 228 aa11.57□□□□□ -0.56
NME3-204ENST00000563498 XCL1P47992 114 aa11.56□□□□□ -0.56
NME3-204ENST00000563498 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
NME3-204ENST00000563498 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
NME3-204ENST00000563498 SDHAF1A6NFY7 115 aa11.55□□□□□ -0.56
NME3-204ENST00000563498 AKAP14Q86UN6 197 aa11.55□□□□□ -0.56
NME3-204ENST00000563498 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
NME3-204ENST00000563498 LINC00959A0A1B0GUT2 108 aa11.54□□□□□ -0.56
NME3-204ENST00000563498 CCL25O15444 150 aa11.54□□□□□ -0.56
NME3-204ENST00000563498 IFITM2Q01629 132 aa11.54□□□□□ -0.56
NME3-204ENST00000563498 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
NME3-204ENST00000563498 TMEM101Q96IK0 257 aa11.54□□□□□ -0.56
NME3-204ENST00000563498 RPP21Q9H633 154 aaKnown RBP11.54□□□□□ -0.56
NME3-204ENST00000563498 I3L3M4 83 aa11.53□□□□□ -0.56
NME3-204ENST00000563498 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
NME3-204ENST00000563498 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
NME3-204ENST00000563498 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
NME3-204ENST00000563498 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
NME3-204ENST00000563498 TRBV6-5A0A0K0K1A5 114 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms