RNA–Protein interactions for RNA: ENST00000563364.2

NIP7-205, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2

Gene NIP7, Length 436 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-205ENST00000563364 RAB5CP51148 216 aa13.1□□□□□ -0.31
NIP7-205ENST00000563364 WDR73Q6P4I2 378 aa13.09□□□□□ -0.31
NIP7-205ENST00000563364 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
NIP7-205ENST00000563364 BIN3Q9NQY0 253 aa13.09□□□□□ -0.31
NIP7-205ENST00000563364 A0A087WYN8 130 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 RAB19A4D1S5 217 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 TEX46H3BTG2 121 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 UBE2L6O14933 153 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 PDE6DO43924 150 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 IFNA1P01562 189 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 NTF3P20783 257 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 COTL1Q14019 142 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 SPACA4Q8TDM5 124 aa13.08□□□□□ -0.32
NIP7-205ENST00000563364 AMTP48728 403 aa13.07□□□□□ -0.32
NIP7-205ENST00000563364 MEF2BQ02080 365 aaPredicted RBP13.07□□□□□ -0.32
NIP7-205ENST00000563364 DPH3Q96FX2 82 aa13.07□□□□□ -0.32
NIP7-205ENST00000563364 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
NIP7-205ENST00000563364 SULT1A2P50226 295 aa13.06□□□□□ -0.32
NIP7-205ENST00000563364 CFAP161Q6P656 301 aa13.06□□□□□ -0.32
NIP7-205ENST00000563364 CNFNQ9BYD5 112 aa13.06□□□□□ -0.32
NIP7-205ENST00000563364 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
NIP7-205ENST00000563364 CTRLP40313 264 aa13.05□□□□□ -0.32
NIP7-205ENST00000563364 EIF5AL1Q6IS14 154 aaKnown RBP13.05□□□□□ -0.32
NIP7-205ENST00000563364 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
NIP7-205ENST00000563364 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
NIP7-205ENST00000563364 MED9Q9NWA0 146 aa13.04□□□□□ -0.32
NIP7-205ENST00000563364 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
NIP7-205ENST00000563364 GATD1Q8NB37 220 aa13.02□□□□□ -0.33
NIP7-205ENST00000563364 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
NIP7-205ENST00000563364 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
NIP7-205ENST00000563364 TNXBP22105 4242 aa13.02□□□□□ -0.33
NIP7-205ENST00000563364 NCR2O95944 276 aa13.01□□□□□ -0.33
NIP7-205ENST00000563364 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
NIP7-205ENST00000563364 TWIST1Q15672 202 aa13.01□□□□□ -0.33
NIP7-205ENST00000563364 C7orf33Q8WU49 177 aa13.01□□□□□ -0.33
NIP7-205ENST00000563364 BCL2P10415 239 aa13□□□□□ -0.33
NIP7-205ENST00000563364 COX6A2Q02221 97 aa13□□□□□ -0.33
NIP7-205ENST00000563364 H7C423 109 aa12.99□□□□□ -0.33
NIP7-205ENST00000563364 PHOX2AO14813 284 aa12.99□□□□□ -0.33
NIP7-205ENST00000563364 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
NIP7-205ENST00000563364 RPP21Q9H633 154 aaKnown RBP12.99□□□□□ -0.33
NIP7-205ENST00000563364 TAGLN2P37802 199 aaKnown RBP12.98□□□□□ -0.33
NIP7-205ENST00000563364 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
NIP7-205ENST00000563364 CHCHD10Q8WYQ3 142 aaPredicted RBP12.98□□□□□ -0.33
NIP7-205ENST00000563364 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
NIP7-205ENST00000563364 TRAV26-2A0A0B4J265 109 aa12.97□□□□□ -0.33
NIP7-205ENST00000563364 IGKV3OR2-268A0A0C4DH90 116 aa12.97□□□□□ -0.33
NIP7-205ENST00000563364 Q6ZNX1 250 aa12.97□□□□□ -0.33
NIP7-205ENST00000563364 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.33
NIP7-205ENST00000563364 TEX261Q6UWH6 196 aa12.96□□□□□ -0.33
NIP7-205ENST00000563364 PRSS3P2Q8NHM4 247 aa12.96□□□□□ -0.33
NIP7-205ENST00000563364 RNASE7Q9H1E1 156 aaKnown RBP12.96□□□□□ -0.33
NIP7-205ENST00000563364 K7EN84 100 aa12.95□□□□□ -0.34
NIP7-205ENST00000563364 APCSP02743 223 aa12.95□□□□□ -0.34
NIP7-205ENST00000563364 MAJINQ3KP22 176 aa12.95□□□□□ -0.34
NIP7-205ENST00000563364 SMIM15Q7Z3B0 74 aa12.95□□□□□ -0.34
NIP7-205ENST00000563364 RPL39LQ96EH5 51 aaKnown RBP12.95□□□□□ -0.34
NIP7-205ENST00000563364 FGF6P10767 208 aa12.94□□□□□ -0.34
NIP7-205ENST00000563364 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
NIP7-205ENST00000563364 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
NIP7-205ENST00000563364 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
NIP7-205ENST00000563364 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.93□□□□□ -0.34
NIP7-205ENST00000563364 IGKV2-29A2NJV5 120 aaPredicted RBP12.93□□□□□ -0.34
NIP7-205ENST00000563364 SDHAF1A6NFY7 115 aa12.93□□□□□ -0.34
NIP7-205ENST00000563364 FOXI1Q12951 378 aa12.93□□□□□ -0.34
NIP7-205ENST00000563364 GTSF1Q8WW33 167 aa12.93□□□□□ -0.34
NIP7-205ENST00000563364 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
NIP7-205ENST00000563364 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
NIP7-205ENST00000563364 STPG4Q8N801 248 aa12.92□□□□□ -0.34
NIP7-205ENST00000563364 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
NIP7-205ENST00000563364 LINC01600Q96MT4 127 aa12.92□□□□□ -0.34
NIP7-205ENST00000563364 LRP2P98164 4655 aa12.92□□□□□ -0.34
NIP7-205ENST00000563364 FOXA3P55318 350 aaPredicted RBP12.91□□□□□ -0.34
NIP7-205ENST00000563364 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
NIP7-205ENST00000563364 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
NIP7-205ENST00000563364 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
NIP7-205ENST00000563364 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
NIP7-205ENST00000563364 TRBV6-5A0A0K0K1A5 114 aa12.9□□□□□ -0.34
NIP7-205ENST00000563364 I3L3M4 83 aa12.9□□□□□ -0.34
NIP7-205ENST00000563364 A0A096LNI7 61 aa12.89□□□□□ -0.35
NIP7-205ENST00000563364 FAM231BA6NCW3 169 aa12.89□□□□□ -0.35
NIP7-205ENST00000563364 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
NIP7-205ENST00000563364 BTF3L4Q96K17 158 aa12.89□□□□□ -0.35
NIP7-205ENST00000563364 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
NIP7-205ENST00000563364 ESDP10768 282 aa12.88□□□□□ -0.35
NIP7-205ENST00000563364 PMCHP20382 165 aa12.88□□□□□ -0.35
NIP7-205ENST00000563364 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
NIP7-205ENST00000563364 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
NIP7-205ENST00000563364 LINC00959A0A1B0GUT2 108 aa12.87□□□□□ -0.35
NIP7-205ENST00000563364 A8MWL6 223 aa12.87□□□□□ -0.35
NIP7-205ENST00000563364 GATCO43716 136 aaKnown RBP12.87□□□□□ -0.35
NIP7-205ENST00000563364 XCL1P47992 114 aa12.87□□□□□ -0.35
NIP7-205ENST00000563364 TCTE3Q8IZS6 198 aa12.87□□□□□ -0.35
NIP7-205ENST00000563364 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
NIP7-205ENST00000563364 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
NIP7-205ENST00000563364 CCL25O15444 150 aa12.85□□□□□ -0.35
NIP7-205ENST00000563364 CT83Q5H943 113 aa12.85□□□□□ -0.35
NIP7-205ENST00000563364 TSHBP01222 138 aa12.84□□□□□ -0.35
NIP7-205ENST00000563364 SPINK6Q6UWN8 80 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms