RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 GTSF1Q8WW33 167 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
USB1-205ENST00000561743 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
USB1-205ENST00000561743 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
USB1-205ENST00000561743 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
USB1-205ENST00000561743 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
USB1-205ENST00000561743 IGLV10-54A0A075B6I4 117 aa8.74□□□□□ -1.01
USB1-205ENST00000561743 AMTP48728 403 aa8.73□□□□□ -1.01
USB1-205ENST00000561743 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
USB1-205ENST00000561743 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
USB1-205ENST00000561743 COTL1Q14019 142 aa8.73□□□□□ -1.01
USB1-205ENST00000561743 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
USB1-205ENST00000561743 FAM231DQ6ZW35 169 aa8.73□□□□□ -1.01
USB1-205ENST00000561743 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
USB1-205ENST00000561743 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
USB1-205ENST00000561743 CEBPGP53567 150 aa8.72□□□□□ -1.01
USB1-205ENST00000561743 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
USB1-205ENST00000561743 A8MWL6 223 aa8.71□□□□□ -1.02
USB1-205ENST00000561743 UBE2L6O14933 153 aa8.71□□□□□ -1.02
USB1-205ENST00000561743 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
USB1-205ENST00000561743 CT83Q5H943 113 aa8.7□□□□□ -1.02
USB1-205ENST00000561743 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
USB1-205ENST00000561743 CLRN3Q8NCR9 226 aa8.7□□□□□ -1.02
USB1-205ENST00000561743 NDUFS6O75380 124 aaKnown RBP8.69□□□□□ -1.02
USB1-205ENST00000561743 TEX261Q6UWH6 196 aa8.69□□□□□ -1.02
USB1-205ENST00000561743 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
USB1-205ENST00000561743 FAM210AQ96ND0 272 aa8.69□□□□□ -1.02
USB1-205ENST00000561743 SMIM7Q9BQ49 75 aa8.69□□□□□ -1.02
USB1-205ENST00000561743 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
USB1-205ENST00000561743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
USB1-205ENST00000561743 hDV102S1A0JD36 115 aa8.68□□□□□ -1.02
USB1-205ENST00000561743 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
USB1-205ENST00000561743 PANO1I0J062 215 aa8.68□□□□□ -1.02
USB1-205ENST00000561743 NCR2O95944 276 aa8.68□□□□□ -1.02
USB1-205ENST00000561743 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
USB1-205ENST00000561743 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
USB1-205ENST00000561743 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
USB1-205ENST00000561743 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
USB1-205ENST00000561743 J3QL48 77 aa8.67□□□□□ -1.02
USB1-205ENST00000561743 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
USB1-205ENST00000561743 APCSP02743 223 aa8.67□□□□□ -1.02
USB1-205ENST00000561743 SRP19P09132 144 aaKnown RBP8.67□□□□□ -1.02
USB1-205ENST00000561743 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
USB1-205ENST00000561743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
USB1-205ENST00000561743 A0A1B0GVG6 124 aa8.66□□□□□ -1.02
USB1-205ENST00000561743 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
USB1-205ENST00000561743 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
USB1-205ENST00000561743 H7C423 109 aa8.66□□□□□ -1.02
USB1-205ENST00000561743 SLPIP03973 132 aa8.66□□□□□ -1.02
USB1-205ENST00000561743 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
USB1-205ENST00000561743 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
USB1-205ENST00000561743 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 TRBV6-5A0A0K0K1A5 114 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 A0A1B0GUT8 65 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 I3L3M4 83 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 RNASEKQ6P5S7 137 aaKnown RBP8.65□□□□□ -1.02
USB1-205ENST00000561743 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
USB1-205ENST00000561743 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
USB1-205ENST00000561743 FGF6P10767 208 aa8.64□□□□□ -1.03
USB1-205ENST00000561743 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
USB1-205ENST00000561743 RNF185Q96GF1 192 aa8.64□□□□□ -1.03
USB1-205ENST00000561743 TMEM191AQ9H0A3 160 aa8.64□□□□□ -1.03
USB1-205ENST00000561743 AP5S1Q9NUS5 200 aa8.64□□□□□ -1.03
USB1-205ENST00000561743 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
USB1-205ENST00000561743 TSHBP01222 138 aa8.63□□□□□ -1.03
USB1-205ENST00000561743 PMCHP20382 165 aa8.63□□□□□ -1.03
USB1-205ENST00000561743 RPS10P46783 165 aaKnown RBP8.63□□□□□ -1.03
USB1-205ENST00000561743 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
USB1-205ENST00000561743 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
USB1-205ENST00000561743 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
USB1-205ENST00000561743 V9GYV3 84 aa8.63□□□□□ -1.03
USB1-205ENST00000561743 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
USB1-205ENST00000561743 ESDP10768 282 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
USB1-205ENST00000561743 RAB4AP20338 218 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 AMN1Q8IY45 258 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 ISOC2Q96AB3 205 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 MRAP2Q96G30 205 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
USB1-205ENST00000561743 POLR2KP53803 58 aaKnown RBP8.61□□□□□ -1.03
USB1-205ENST00000561743 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
USB1-205ENST00000561743 NUP35Q8NFH5 326 aa8.61□□□□□ -1.03
USB1-205ENST00000561743 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
USB1-205ENST00000561743 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
USB1-205ENST00000561743 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 C9JQL5 133 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
USB1-205ENST00000561743 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
USB1-205ENST00000561743 FOXI1Q12951 378 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 TMEM241Q24JQ0 296 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 BTF3L4Q96K17 158 aa8.6□□□□□ -1.03
USB1-205ENST00000561743 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 GVQW2A0A096LPI5 108 aaPredicted RBP8.59□□□□□ -1.03
USB1-205ENST00000561743 SMKR1H3BMG3 65 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 RIGQ13278 110 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms