RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 NXPH4O95158 308 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 NDUFA7O95182 113 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 CSPG4Q6UVK1 2322 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 FBN2P35556 2912 aa10.38□□□□□ -0.75
RABGGTA-220ENST00000560998 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 EMP1P54849 157 aa10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 LINC00477Q96M19 166 aa10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 C9orf153Q5TBE3 101 aa10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 MAPK1IP1LQ8NDC0 245 aa10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 FAM208BQ5VWN6 2430 aa10.37□□□□□ -0.75
RABGGTA-220ENST00000560998 J3KT08 172 aa10.36□□□□□ -0.75
RABGGTA-220ENST00000560998 SPXQ9BT56 116 aa10.36□□□□□ -0.75
RABGGTA-220ENST00000560998 FAM236AA0A1B0GUQ0 79 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 FAM236BA0A1B0GV22 79 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 LST1O00453 97 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 OVOL1O14753 267 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 PRR9Q5T870 116 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 RHPN1-AS1Q9BWJ2 59 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 PSMB8P28062 276 aa10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-220ENST00000560998 RHOHQ15669 191 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 TRBV27A0A0K0K1C4 114 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 K7EMT4 169 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 FSHBP01225 129 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 KRTAP10-9P60411 292 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 RPL11P62913 178 aaKnown RBP10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 ZFAND2AQ8N6M9 145 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 BEX4Q9NWD9 120 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
RABGGTA-220ENST00000560998 POLQO75417 2590 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 IGHV4-31P0DP07 118 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 DEFB1P60022 68 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 RPS28P62857 69 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 NSUN5P1Q3KNT7 163 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 CR1P17927 2039 aa10.33□□□□□ -0.76
RABGGTA-220ENST00000560998 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 ZNF22P17026 224 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 CXCL5P42830 114 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 WIPF1O43516 503 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 EDN2P20800 178 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 LINC00315P59091 139 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 DUX3Q96PT4 197 aa10.32□□□□□ -0.76
RABGGTA-220ENST00000560998 CENPEQ02224 2701 aa10.31□□□□□ -0.76
RABGGTA-220ENST00000560998 IGKV3-7A0A075B6H7 116 aa10.31□□□□□ -0.76
RABGGTA-220ENST00000560998 SMIM9A6NGZ8 99 aa10.31□□□□□ -0.76
RABGGTA-220ENST00000560998 ZANQ9Y493 2812 aa10.31□□□□□ -0.76
RABGGTA-220ENST00000560998 HERVK_113P63121 156 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 Q6YL49 198 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 LITAFQ99732 161 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 F6UB75 175 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 DEFB113Q30KQ7 82 aa10.3□□□□□ -0.76
RABGGTA-220ENST00000560998 MIAQ16674 131 aa10.29□□□□□ -0.76
RABGGTA-220ENST00000560998 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
RABGGTA-220ENST00000560998 CSMD2Q7Z408 3487 aa10.29□□□□□ -0.76
RABGGTA-220ENST00000560998 PTPN13Q12923 2485 aa10.29□□□□□ -0.76
RABGGTA-220ENST00000560998 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 C3orf56Q8N813 242 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 CRYGAP11844 174 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 COX7CP15954 63 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 ZNF702PQ9H963 129 aa10.28□□□□□ -0.76
RABGGTA-220ENST00000560998 PRRC2AP48634 2157 aaKnown RBP10.27□□□□□ -0.76
RABGGTA-220ENST00000560998 TIMM17BO60830 172 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 TMEM61Q8N0U2 210 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 I3L3M4 83 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 IGHV3-30-3P0DP02 117 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 CLEC2BQ92478 149 aa10.26□□□□□ -0.77
RABGGTA-220ENST00000560998 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 ABCA12Q86UK0 2595 aa10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 SPRY2O43597 315 aa10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 Q96MF0 132 aa10.25□□□□□ -0.77
RABGGTA-220ENST00000560998 MXRA5Q9NR99 2828 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 KLLNB2CW77 178 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 GNRH2O43555 120 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 PRSS2P07478 247 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 GAGE2AQ6NT46 116 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
RABGGTA-220ENST00000560998 EPG5Q9HCE0 2579 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms