RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
TPM1-224ENST00000560615 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
TPM1-224ENST00000560615 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.5
TPM1-224ENST00000560615 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
TPM1-224ENST00000560615 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
TPM1-224ENST00000560615 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
TPM1-224ENST00000560615 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
TPM1-224ENST00000560615 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
TPM1-224ENST00000560615 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
TPM1-224ENST00000560615 TWIST1Q15672 202 aa11.87□□□□□ -0.51
TPM1-224ENST00000560615 Q6ZRU5 148 aa11.86□□□□□ -0.51
TPM1-224ENST00000560615 BCL2P10415 239 aa11.85□□□□□ -0.51
TPM1-224ENST00000560615 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
TPM1-224ENST00000560615 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
TPM1-224ENST00000560615 NUDT10Q8NFP7 164 aa11.85□□□□□ -0.51
TPM1-224ENST00000560615 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
TPM1-224ENST00000560615 CTRLP40313 264 aa11.84□□□□□ -0.51
TPM1-224ENST00000560615 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
TPM1-224ENST00000560615 H7C423 109 aa11.83□□□□□ -0.52
TPM1-224ENST00000560615 NCR2O95944 276 aa11.83□□□□□ -0.52
TPM1-224ENST00000560615 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
TPM1-224ENST00000560615 CNFNQ9BYD5 112 aa11.83□□□□□ -0.52
TPM1-224ENST00000560615 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
TPM1-224ENST00000560615 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
TPM1-224ENST00000560615 PANO1I0J062 215 aa11.82□□□□□ -0.52
TPM1-224ENST00000560615 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
TPM1-224ENST00000560615 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
TPM1-224ENST00000560615 A0A087WYN8 130 aa11.81□□□□□ -0.52
TPM1-224ENST00000560615 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
TPM1-224ENST00000560615 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
TPM1-224ENST00000560615 HNRNPA3P51991 378 aaKnown RBP11.81□□□□□ -0.52
TPM1-224ENST00000560615 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
TPM1-224ENST00000560615 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
TPM1-224ENST00000560615 SLC51BQ86UW2 128 aa11.8□□□□□ -0.52
TPM1-224ENST00000560615 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
TPM1-224ENST00000560615 SPACA4Q8TDM5 124 aa11.8□□□□□ -0.52
TPM1-224ENST00000560615 APCSP02743 223 aa11.79□□□□□ -0.52
TPM1-224ENST00000560615 BTF3L4Q96K17 158 aa11.79□□□□□ -0.52
TPM1-224ENST00000560615 NDUFS6O75380 124 aaKnown RBP11.78□□□□□ -0.52
TPM1-224ENST00000560615 TMEM101Q96IK0 257 aa11.78□□□□□ -0.52
TPM1-224ENST00000560615 FAM210AQ96ND0 272 aa11.78□□□□□ -0.52
TPM1-224ENST00000560615 RNASE7Q9H1E1 156 aaKnown RBP11.78□□□□□ -0.52
TPM1-224ENST00000560615 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
TPM1-224ENST00000560615 SLPIP03973 132 aa11.77□□□□□ -0.53
TPM1-224ENST00000560615 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
TPM1-224ENST00000560615 OCC1Q8TAD7 63 aa11.77□□□□□ -0.53
TPM1-224ENST00000560615 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
TPM1-224ENST00000560615 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
TPM1-224ENST00000560615 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
TPM1-224ENST00000560615 A8MWL6 223 aa11.76□□□□□ -0.53
TPM1-224ENST00000560615 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
TPM1-224ENST00000560615 PMCHP20382 165 aa11.76□□□□□ -0.53
TPM1-224ENST00000560615 COX6A2Q02221 97 aa11.76□□□□□ -0.53
TPM1-224ENST00000560615 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
TPM1-224ENST00000560615 LRP1Q07954 4544 aaKnown RBP11.76□□□□□ -0.53
TPM1-224ENST00000560615 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
TPM1-224ENST00000560615 FGF6P10767 208 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 MAJINQ3KP22 176 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 HIGD2BQ4VC39 106 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
TPM1-224ENST00000560615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
TPM1-224ENST00000560615 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
TPM1-224ENST00000560615 TMEM250H0YL14 139 aa11.74□□□□□ -0.53
TPM1-224ENST00000560615 I3L3M4 83 aa11.74□□□□□ -0.53
TPM1-224ENST00000560615 Q6ZNX1 250 aa11.74□□□□□ -0.53
TPM1-224ENST00000560615 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
TPM1-224ENST00000560615 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
TPM1-224ENST00000560615 GVQW2A0A096LPI5 108 aaPredicted RBP11.73□□□□□ -0.53
TPM1-224ENST00000560615 K7EN84 100 aa11.73□□□□□ -0.53
TPM1-224ENST00000560615 BLOC1S1P78537 153 aa11.73□□□□□ -0.53
TPM1-224ENST00000560615 GTSF1Q8WW33 167 aa11.73□□□□□ -0.53
TPM1-224ENST00000560615 PHOX2AO14813 284 aa11.72□□□□□ -0.53
TPM1-224ENST00000560615 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
TPM1-224ENST00000560615 FAT3Q8TDW7 4589 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 IGKV2-24A0A0C4DH68 120 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 CT83Q5H943 113 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 STPG4Q8N801 248 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 ST20Q9HBF5 79 aa11.71□□□□□ -0.53
TPM1-224ENST00000560615 HMCN2Q8NDA2 5059 aa11.7□□□□□ -0.54
TPM1-224ENST00000560615 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
TPM1-224ENST00000560615 SS18Q15532 418 aa11.7□□□□□ -0.54
TPM1-224ENST00000560615 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
TPM1-224ENST00000560615 MT1HL1P0DM35 61 aa11.69□□□□□ -0.54
TPM1-224ENST00000560615 XCL1P47992 114 aa11.69□□□□□ -0.54
TPM1-224ENST00000560615 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
TPM1-224ENST00000560615 SMAGPQ0VAQ4 97 aa11.69□□□□□ -0.54
TPM1-224ENST00000560615 FOXI1Q12951 378 aa11.69□□□□□ -0.54
TPM1-224ENST00000560615 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
TPM1-224ENST00000560615 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
TPM1-224ENST00000560615 CCL25O15444 150 aa11.67□□□□□ -0.54
TPM1-224ENST00000560615 CEBPGP53567 150 aa11.67□□□□□ -0.54
TPM1-224ENST00000560615 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
TPM1-224ENST00000560615 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
TPM1-224ENST00000560615 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
TPM1-224ENST00000560615 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
TPM1-224ENST00000560615 FAM231BA6NCW3 169 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms