RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 SCIMPQ6UWF3 145 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 ATP11AUNQ6ZP68 121 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 ATOH7Q8N100 152 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 ATP6V0E2Q8NHE4 81 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 AGPAT4-IT1Q9H0P7 198 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 CCDC167Q9P0B6 97 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 CTTNBP2Q8WZ74 1663 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 IGF2RP11717 2491 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 SMG1Q96Q15 3661 aaKnown RBP0.67□□□□□ -2.3
USP8-211ENST00000560527 DNAH14Q0VDD8 3507 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 PTPRZ1P23471 2315 aaPredicted RBP0.67□□□□□ -2.3
USP8-211ENST00000560527 ZMYM4Q5VZL5 1548 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 KCPQ6ZWJ8 1503 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 MTORP42345 2549 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 CELSR1Q9NYQ6 3014 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 MBD5Q9P267 1494 aa0.67□□□□□ -2.3
USP8-211ENST00000560527 PRRC2CQ9Y520 2896 aaKnown RBP0.67□□□□□ -2.3
USP8-211ENST00000560527 SMG6Q86US8 1419 aaKnown RBP0.66□□□□□ -2.3
USP8-211ENST00000560527 LOC400499M0QZD8 3231 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 TRAV12-2A0A075B6T6 113 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 C20orf202A1L168 122 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 YPEL1O60688 119 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 SNCGO76070 127 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 APODP05090 189 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 IL5P05113 134 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 PIRTP0C851 137 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 SLC25A6P12236 298 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 POLR2JP52435 117 aaKnown RBP0.66□□□□□ -2.3
USP8-211ENST00000560527 UNQ5815/PRO19632Q6UWF5 114 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 Q6ZQY7 126 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 DYNLRB2Q8TF09 96 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 PP6455Q8WZ26 134 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 LSM10Q969L4 123 aaKnown RBP0.66□□□□□ -2.3
USP8-211ENST00000560527 C14orf144Q96I85 54 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 CCL19Q99731 98 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 TCEAL7Q9BRU2 100 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 TMEM242Q9NWH2 141 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 NDUFA12Q9UI09 145 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 RNF17Q9BXT8 1623 aaKnown RBP0.66□□□□□ -2.3
USP8-211ENST00000560527 TMEM2Q9UHN6 1383 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 SPTA1P02549 2419 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 UHRF1BP1LA0JNW5 1464 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 AKAP11Q9UKA4 1901 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 LAMC3Q9Y6N6 1575 aa0.66□□□□□ -2.3
USP8-211ENST00000560527 MYOM3Q5VTT5 1437 aa0.65□□□□□ -2.3
USP8-211ENST00000560527 KMT2DO14686 5537 aa0.65□□□□□ -2.3
USP8-211ENST00000560527 MAP3K1Q13233 1512 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 LRBAP50851 2863 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 TRBV30A0A0K0K1B3 111 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 NBDYA0A0U1RRE5 68 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 RBP2P50120 134 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 GNG4P50150 75 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 TPPP2P59282 170 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 UBE2G1P62253 170 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 PPP3R1P63098 170 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 MRPS10P82664 201 aaKnown RBP0.65□□□□□ -2.31
USP8-211ENST00000560527 CATR1Q13166 79 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 LINC01545Q5VT33 79 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 OR2T2Q6IF00 324 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 MRPL54Q6P161 138 aaKnown RBP0.65□□□□□ -2.31
USP8-211ENST00000560527 LINC00575Q6W349 94 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 VSTM2AQ8TAG5 236 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 TSKUQ8WUA8 353 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 SPTSSAQ969W0 71 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 DMAC1Q96GE9 116 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 LINC00208Q96KT6 92 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 SNRNP25Q9BV90 132 aaKnown RBP0.65□□□□□ -2.31
USP8-211ENST00000560527 ATG5Q9H1Y0 275 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 RERGLQ9H628 205 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 ADGRB1O14514 1584 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 ZZEF1O43149 2961 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 CUL7Q14999 1698 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 ROBO1Q9Y6N7 1651 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 VPS13AQ96RL7 3174 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 MUC22E2RYF6 1773 aaPredicted RBP0.65□□□□□ -2.31
USP8-211ENST00000560527 HMCN2Q8NDA2 5059 aa0.65□□□□□ -2.31
USP8-211ENST00000560527 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 NAIPQ13075 1403 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 ADCY10Q96PN6 1610 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 ZGRF1Q86YA3 2104 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 MCRIP1C9JLW8 97 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 NDUFB6O95139 128 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 RBM3P98179 157 aaKnown RBP0.64□□□□□ -2.31
USP8-211ENST00000560527 FXYD3Q14802 87 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 Q56UQ5 140 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 C9orf153Q5TBE3 101 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 SPANXN1Q5VSR9 72 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 XAF1Q6GPH4 301 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 COPS9Q8WXC6 57 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 NAA60Q9H7X0 242 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 COA4Q9NYJ1 87 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 MRPL35Q9NZE8 188 aaKnown RBP0.64□□□□□ -2.31
USP8-211ENST00000560527 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 EIF4G3O43432 1585 aaKnown RBP0.64□□□□□ -2.31
USP8-211ENST00000560527 TTC37Q6PGP7 1564 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 TGP01266 2768 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 FREM2Q5SZK8 3169 aa0.64□□□□□ -2.31
USP8-211ENST00000560527 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms