RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 STHQ8IWL8 128 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 PTH2Q96A98 100 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 HIST1H4GQ99525 98 aa8.02□□□□□ -1.13
SPG11-217ENST00000559511 NHP2Q9NX24 153 aaKnown RBP8.02□□□□□ -1.13
SPG11-217ENST00000559511 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
SPG11-217ENST00000559511 NSD1Q96L73 2696 aaPredicted RBP8.01□□□□□ -1.13
SPG11-217ENST00000559511 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
SPG11-217ENST00000559511 INAFM1C9JVW0 142 aa8.01□□□□□ -1.13
SPG11-217ENST00000559511 A0A1W2PPM0 123 aa8□□□□□ -1.13
SPG11-217ENST00000559511 GAGE10A6NGK3 116 aa8□□□□□ -1.13
SPG11-217ENST00000559511 C1orf158Q8N1D5 194 aa8□□□□□ -1.13
SPG11-217ENST00000559511 RNASE8Q8TDE3 154 aaKnown RBP8□□□□□ -1.13
SPG11-217ENST00000559511 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
SPG11-217ENST00000559511 IGHV3OR16-12A0A075B7B8 117 aa8□□□□□ -1.13
SPG11-217ENST00000559511 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
SPG11-217ENST00000559511 KRTAP10-3P60369 221 aa8□□□□□ -1.13
SPG11-217ENST00000559511 BEAN1Q3B7T3 259 aa8□□□□□ -1.13
SPG11-217ENST00000559511 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
SPG11-217ENST00000559511 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
SPG11-217ENST00000559511 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 CYSRT1A8MQ03 144 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 K7EP34 96 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 NFE4Q86UQ8 179 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 SPXQ9BT56 116 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 HIVEP1P15822 2718 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 HERVK_113P61574 105 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 SAMD5Q5TGI4 173 aa7.99□□□□□ -1.13
SPG11-217ENST00000559511 FN1P02751 2386 aaKnown RBP7.98□□□□□ -1.13
SPG11-217ENST00000559511 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
SPG11-217ENST00000559511 RS1O15537 224 aa7.98□□□□□ -1.13
SPG11-217ENST00000559511 SAP30O75446 220 aa7.98□□□□□ -1.13
SPG11-217ENST00000559511 IGHV3-53P01767 116 aa7.98□□□□□ -1.13
SPG11-217ENST00000559511 CEMP1Q6PRD7 247 aaPredicted RBP7.98□□□□□ -1.13
SPG11-217ENST00000559511 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
SPG11-217ENST00000559511 RHODO00212 210 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 C12orf74Q32Q52 190 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 IL17DQ8TAD2 202 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 SPCS1Q9Y6A9 102 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 NOTCH3Q9UM47 2321 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 VCX2Q9H322 139 aa7.97□□□□□ -1.13
SPG11-217ENST00000559511 MAST4O15021 2626 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 C2CD3Q4AC94 2353 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 IGHV3-38A0A0C4DH36 116 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 A0A0J9YXV3 536 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 FABP2P12104 132 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 AMELXQ99217 191 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.13
SPG11-217ENST00000559511 A0A0J9YY99 117 aa7.96□□□□□ -1.14
SPG11-217ENST00000559511 TMEM223A0PJW6 202 aa7.96□□□□□ -1.14
SPG11-217ENST00000559511 IGLV1-51P01701 117 aa7.96□□□□□ -1.14
SPG11-217ENST00000559511 GIG44P09565 113 aaPredicted RBP7.96□□□□□ -1.14
SPG11-217ENST00000559511 ZNF22P17026 224 aaPredicted RBP7.96□□□□□ -1.14
SPG11-217ENST00000559511 NDUFA11Q86Y39 141 aa7.96□□□□□ -1.14
SPG11-217ENST00000559511 TRGV1A0A0A0MS02 117 aa7.95□□□□□ -1.14
SPG11-217ENST00000559511 IGLL5B9A064 214 aa7.95□□□□□ -1.14
SPG11-217ENST00000559511 J3QQQ9 107 aa7.95□□□□□ -1.14
SPG11-217ENST00000559511 RNASE13Q5GAN3 156 aaKnown RBP7.95□□□□□ -1.14
SPG11-217ENST00000559511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
SPG11-217ENST00000559511 A0A1B0GWB2 263 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
SPG11-217ENST00000559511 OR5A1Q8NGJ0 315 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 IGHV3-64A0A075B6Q5 118 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 SRSF9Q13242 221 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPG11-217ENST00000559511 Q6ZTI0 123 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 TMEM263Q8WUH6 116 aaKnown RBP7.94□□□□□ -1.14
SPG11-217ENST00000559511 ZNF479Q96JC4 524 aa7.94□□□□□ -1.14
SPG11-217ENST00000559511 LEPROTO15243 131 aa7.93□□□□□ -1.14
SPG11-217ENST00000559511 RBX1P62877 108 aa7.93□□□□□ -1.14
SPG11-217ENST00000559511 VWFP04275 2813 aa7.93□□□□□ -1.14
SPG11-217ENST00000559511 CRLF1O75462 422 aa7.93□□□□□ -1.14
SPG11-217ENST00000559511 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
SPG11-217ENST00000559511 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
SPG11-217ENST00000559511 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
SPG11-217ENST00000559511 OCIAD2Q56VL3 154 aa7.93□□□□□ -1.14
SPG11-217ENST00000559511 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
SPG11-217ENST00000559511 SLC25A29Q8N8R3 303 aa7.92□□□□□ -1.14
SPG11-217ENST00000559511 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
SPG11-217ENST00000559511 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 CRYBA4P53673 196 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 RRN3P1Q2M238 152 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 Q6ZUT4 128 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 LINC00482Q8N8I6 264 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 NOP10Q9NPE3 64 aaKnown RBP7.91□□□□□ -1.14
SPG11-217ENST00000559511 SPANXB1Q9NS25 103 aaPredicted RBP7.91□□□□□ -1.14
SPG11-217ENST00000559511 IGHV3-30P01768 117 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 PF4P02776 101 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 IGHV3-30-5P0DP03 117 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 UBE2D1P51668 147 aa7.91□□□□□ -1.14
SPG11-217ENST00000559511 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
SPG11-217ENST00000559511 TRAV4A0A0B4J268 109 aa7.9□□□□□ -1.15
SPG11-217ENST00000559511 K7EQD1 137 aa7.9□□□□□ -1.15
SPG11-217ENST00000559511 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms