RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MIFP14174 115 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 UBE2D3P61077 147 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 A0A096LPF7 62 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 G3V318 75 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 DIAPH2-AS1Q14236 149 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 IGFL3Q6UXB1 125 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 LYPD2Q6UXB3 125 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 SERTAD4-AS1Q5TG53 156 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 IGKV1-6A0A0C4DH72 117 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 C15orf65H3BRN8 121 aa6.83□□□□□ -1.32
SYNE3-205ENST00000557275 WIPF3A6NGB9 483 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
SYNE3-205ENST00000557275 RAI1Q7Z5J4 1906 aaPredicted RBP6.82□□□□□ -1.32
SYNE3-205ENST00000557275 E7EQL1 145 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 A0A0J9YY99 117 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 TFF1P04155 84 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 C20orf203Q8NBC4 194 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 COL8A2P25067 703 aa6.82□□□□□ -1.32
SYNE3-205ENST00000557275 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 RNF223E7ERA6 249 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 Q8NFD4 153 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 SP5Q6BEB4 398 aaPredicted RBP6.81□□□□□ -1.32
SYNE3-205ENST00000557275 CXCL6P80162 114 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
SYNE3-205ENST00000557275 LINC01548A6NM66 108 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 UBE2D1P51668 147 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 MLANAQ16655 118 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 FLVCR1-AS1Q8TAF5 88 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 C4orf3Q8WVX3 66 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 IGLV3-9A0A075B6K5 115 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 TMEM105Q8N8V8 129 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 IGHV4-59P01825 116 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 A0A087WV48 116 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 Q8N9W7 124 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 Q96MF0 132 aa6.8□□□□□ -1.32
SYNE3-205ENST00000557275 Q8N976 141 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 RPL39P62891 51 aaKnown RBP6.79□□□□□ -1.32
SYNE3-205ENST00000557275 RUSC1-AS1Q66K80 236 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 EPG5Q9HCE0 2579 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 KLK12Q9UKR0 248 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 LYPD6Q86Y78 171 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 CPAMD8Q8IZJ3 1885 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 Q6JHZ5 121 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 HIGD2AQ9BW72 106 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 WT1P19544 449 aaPredicted RBP6.79□□□□□ -1.32
SYNE3-205ENST00000557275 IGLV11-55A0A075B6I3 123 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 TRBV7-6A0A0J9YX20 115 aa6.79□□□□□ -1.32
SYNE3-205ENST00000557275 IGLV1-44P01699 117 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 B3GALT5-AS1P59052 145 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.78□□□□□ -1.32
SYNE3-205ENST00000557275 Q6ZVQ6 151 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 EIF4EBP1Q13541 118 aaPredicted RBP6.78□□□□□ -1.32
SYNE3-205ENST00000557275 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 EPOPA6NHQ4 379 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 IGHV3-30P01768 117 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 IGHV3-33P01772 117 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 IGHV3-30-5P0DP03 117 aa6.78□□□□□ -1.32
SYNE3-205ENST00000557275 LINC00322Q6ZN03 302 aaPredicted RBP6.77□□□□□ -1.32
SYNE3-205ENST00000557275 MAST4O15021 2626 aa6.77□□□□□ -1.33
SYNE3-205ENST00000557275 REG3AQ06141 175 aa6.77□□□□□ -1.33
SYNE3-205ENST00000557275 COL5A1P20908 1838 aaPredicted RBP6.77□□□□□ -1.33
SYNE3-205ENST00000557275 ODF3L1Q8IXM7 274 aa6.77□□□□□ -1.33
SYNE3-205ENST00000557275 CELA1Q9UNI1 258 aa6.77□□□□□ -1.33
SYNE3-205ENST00000557275 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
SYNE3-205ENST00000557275 A0A087WZ39 114 aa6.76□□□□□ -1.33
SYNE3-205ENST00000557275 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
SYNE3-205ENST00000557275 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
SYNE3-205ENST00000557275 C17orf82Q86X59 251 aaPredicted RBP6.76□□□□□ -1.33
SYNE3-205ENST00000557275 C1orf158Q8N1D5 194 aa6.76□□□□□ -1.33
SYNE3-205ENST00000557275 I3L2K1 104 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 PRR4Q16378 134 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 LTBP1Q14766 1721 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 LST1O00453 97 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 TRIAP1O43715 76 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
SYNE3-205ENST00000557275 K7EIM0 57 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 LINC00205P59089 165 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 FAM19A1Q7Z5A9 133 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 MYCNOSP40205 109 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 C1orf147Q96MC9 270 aaPredicted RBP6.74□□□□□ -1.33
SYNE3-205ENST00000557275 CTSGP08311 255 aa6.74□□□□□ -1.33
SYNE3-205ENST00000557275 IGKV1-17P01599 117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms