RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
SNX6-209ENST00000557265 PGLYRP4Q96LB8 373 aa7.64□□□□□ -1.19
SNX6-209ENST00000557265 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
SNX6-209ENST00000557265 GIPP09681 153 aaPredicted RBP7.63□□□□□ -1.19
SNX6-209ENST00000557265 COTL1Q14019 142 aa7.63□□□□□ -1.19
SNX6-209ENST00000557265 TMUB2Q71RG4 321 aa7.63□□□□□ -1.19
SNX6-209ENST00000557265 NIT2Q9NQR4 276 aa7.63□□□□□ -1.19
SNX6-209ENST00000557265 BATF3Q9NR55 127 aa7.63□□□□□ -1.19
SNX6-209ENST00000557265 LINC00474Q9P2X8 69 aa7.63□□□□□ -1.19
SNX6-209ENST00000557265 A0A1B0GV50 99 aa7.62□□□□□ -1.19
SNX6-209ENST00000557265 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
SNX6-209ENST00000557265 Q6ZRP5 223 aa7.62□□□□□ -1.19
SNX6-209ENST00000557265 FER1L6-AS1Q8NA97 138 aa7.62□□□□□ -1.19
SNX6-209ENST00000557265 CHCHD10Q8WYQ3 142 aaPredicted RBP7.62□□□□□ -1.19
SNX6-209ENST00000557265 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
SNX6-209ENST00000557265 PFDN1O60925 122 aa7.61□□□□□ -1.19
SNX6-209ENST00000557265 CACNG7P62955 275 aa7.61□□□□□ -1.19
SNX6-209ENST00000557265 SFT2D1Q8WV19 159 aa7.61□□□□□ -1.19
SNX6-209ENST00000557265 LPAP08519 4548 aa7.61□□□□□ -1.19
SNX6-209ENST00000557265 RPL35P42766 123 aaKnown RBP7.6□□□□□ -1.19
SNX6-209ENST00000557265 AMMECR1LQ6DCA0 310 aa7.6□□□□□ -1.19
SNX6-209ENST00000557265 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
SNX6-209ENST00000557265 MBD3L1Q8WWY6 194 aa7.6□□□□□ -1.19
SNX6-209ENST00000557265 MUC2Q02817 5179 aa7.59□□□□□ -1.19
SNX6-209ENST00000557265 RPS20P60866 119 aaKnown RBP7.59□□□□□ -1.19
SNX6-209ENST00000557265 FOXI1Q12951 378 aa7.59□□□□□ -1.19
SNX6-209ENST00000557265 FAM213BQ8TBF2 198 aa7.59□□□□□ -1.19
SNX6-209ENST00000557265 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
SNX6-209ENST00000557265 F2Z2F3 143 aa7.58□□□□□ -1.2
SNX6-209ENST00000557265 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
SNX6-209ENST00000557265 RNASEKQ6P5S7 137 aaKnown RBP7.58□□□□□ -1.2
SNX6-209ENST00000557265 KCNRGQ8N5I3 272 aa7.58□□□□□ -1.2
SNX6-209ENST00000557265 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
SNX6-209ENST00000557265 ARPC5O15511 151 aa7.57□□□□□ -1.2
SNX6-209ENST00000557265 NTF3P20783 257 aa7.57□□□□□ -1.2
SNX6-209ENST00000557265 XCL1P47992 114 aa7.57□□□□□ -1.2
SNX6-209ENST00000557265 LYZL1Q6UWQ5 148 aa7.57□□□□□ -1.2
SNX6-209ENST00000557265 CARD19Q96LW7 228 aa7.57□□□□□ -1.2
SNX6-209ENST00000557265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
SNX6-209ENST00000557265 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
SNX6-209ENST00000557265 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 FAM231BA6NCW3 169 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 G3V3Q6 166 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 FGF6P10767 208 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 CENPWQ5EE01 88 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 Q6ZNX1 250 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
SNX6-209ENST00000557265 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
SNX6-209ENST00000557265 IGHV1-58A0A0C4DH39 117 aa7.55□□□□□ -1.2
SNX6-209ENST00000557265 XKRY2A2RUG3 117 aa7.55□□□□□ -1.2
SNX6-209ENST00000557265 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
SNX6-209ENST00000557265 IFNA1P01562 189 aa7.55□□□□□ -1.2
SNX6-209ENST00000557265 H7C423 109 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 CCL25O15444 150 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 NCR2O95944 276 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 H2AFB1P0C5Y9 115 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 PTTG1IPP53801 180 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 GAGE2BQ13066 116 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 TWIST1Q15672 202 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 OR5A1Q8NGJ0 315 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 C11orf52Q96A22 123 aa7.54□□□□□ -1.2
SNX6-209ENST00000557265 LINC00959A0A1B0GUT2 108 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 RAB19A4D1S5 217 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 APCSP02743 223 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 GNG4P50150 75 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 RPL39LQ96EH5 51 aaKnown RBP7.53□□□□□ -1.2
SNX6-209ENST00000557265 GNG13Q9P2W3 67 aa7.53□□□□□ -1.2
SNX6-209ENST00000557265 CCL20P78556 96 aa7.52□□□□□ -1.21
SNX6-209ENST00000557265 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
SNX6-209ENST00000557265 BTF3L4Q96K17 158 aa7.52□□□□□ -1.21
SNX6-209ENST00000557265 PSORS1C2Q9UIG4 136 aa7.52□□□□□ -1.21
SNX6-209ENST00000557265 LOC107984640A0A0U1RRK4 108 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 MT-ND6P03923 174 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
SNX6-209ENST00000557265 CTRLP40313 264 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 CAMPP49913 170 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 TMEM101Q96IK0 257 aa7.51□□□□□ -1.21
SNX6-209ENST00000557265 SDHAF1A6NFY7 115 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 SS18Q15532 418 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 C9orf116Q5BN46 136 aaPredicted RBP7.5□□□□□ -1.21
SNX6-209ENST00000557265 C1orf137Q5JT78 98 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 NUDT10Q8NFP7 164 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 ISOC2Q96AB3 205 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 SMIM12Q96EX1 92 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 NUDT11Q96G61 164 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 MANBALQ9NQG1 85 aa7.5□□□□□ -1.21
SNX6-209ENST00000557265 I3L3M4 83 aa7.49□□□□□ -1.21
SNX6-209ENST00000557265 BCL2P10415 239 aa7.49□□□□□ -1.21
SNX6-209ENST00000557265 PMCHP20382 165 aa7.49□□□□□ -1.21
SNX6-209ENST00000557265 FOXA3P55318 350 aaPredicted RBP7.49□□□□□ -1.21
SNX6-209ENST00000557265 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
SNX6-209ENST00000557265 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
SNX6-209ENST00000557265 BIN3Q9NQY0 253 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms