RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 TMEM141Q96I45 108 aa13.99□□□□□ -0.17
FOXN3-214ENST00000557258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-214ENST00000557258 A0A0J9YXV3 536 aa13.98□□□□□ -0.17
FOXN3-214ENST00000557258 IGKV2-29A2NJV5 120 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-214ENST00000557258 FHL3Q13643 280 aa13.98□□□□□ -0.17
FOXN3-214ENST00000557258 TRBV7-3A0A075B6L6 115 aa13.98□□□□□ -0.17
FOXN3-214ENST00000557258 A8MTW9 85 aa13.98□□□□□ -0.17
FOXN3-214ENST00000557258 K7EP34 96 aa13.97□□□□□ -0.17
FOXN3-214ENST00000557258 SRSF9Q13242 221 aaKnown RBP eCLIP13.97□□□□□ -0.173e-8■■■■□ 26.7
FOXN3-214ENST00000557258 C1orf158Q8N1D5 194 aa13.97□□□□□ -0.17
FOXN3-214ENST00000557258 TRGV1A0A0A0MS02 117 aa13.97□□□□□ -0.17
FOXN3-214ENST00000557258 RPL35AP18077 110 aaKnown RBP13.97□□□□□ -0.17
FOXN3-214ENST00000557258 C12orf74Q32Q52 190 aa13.97□□□□□ -0.17
FOXN3-214ENST00000557258 UFSP1Q6NVU6 142 aa13.97□□□□□ -0.17
FOXN3-214ENST00000557258 IGLV4-3A0A075B6K6 122 aa13.96□□□□□ -0.17
FOXN3-214ENST00000557258 FABP2P12104 132 aa13.96□□□□□ -0.17
FOXN3-214ENST00000557258 MTURNQ8N3F0 131 aa13.96□□□□□ -0.17
FOXN3-214ENST00000557258 ADARB2-AS1A8MUL3 147 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 A8MWV9 139 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 RHOHQ15669 191 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 GTF2H5Q6ZYL4 71 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 VCX2Q9H322 139 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 TRAV2A0A0B4J234 112 aa13.95□□□□□ -0.18
FOXN3-214ENST00000557258 TSSC4Q9Y5U2 329 aaPredicted RBP13.95□□□□□ -0.18
FOXN3-214ENST00000557258 HERVK_113P61574 105 aa13.93□□□□□ -0.18
FOXN3-214ENST00000557258 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
FOXN3-214ENST00000557258 Q6ZTI0 123 aa13.93□□□□□ -0.18
FOXN3-214ENST00000557258 ZNF479Q96JC4 524 aa13.93□□□□□ -0.18
FOXN3-214ENST00000557258 SPXQ9BT56 116 aa13.93□□□□□ -0.18
FOXN3-214ENST00000557258 IGLL5B9A064 214 aa13.92□□□□□ -0.18
FOXN3-214ENST00000557258 OCIAD2Q56VL3 154 aa13.92□□□□□ -0.18
FOXN3-214ENST00000557258 RNASE1P07998 156 aaKnown RBP13.91□□□□□ -0.18
FOXN3-214ENST00000557258 LINC00467Q9BRT7 94 aa13.91□□□□□ -0.18
FOXN3-214ENST00000557258 A8MZ25 164 aa13.91□□□□□ -0.18
FOXN3-214ENST00000557258 J3QQQ9 107 aa13.91□□□□□ -0.18
FOXN3-214ENST00000557258 APOMO95445 188 aa13.91□□□□□ -0.18
FOXN3-214ENST00000557258 NSD1Q96L73 2696 aaPredicted RBP13.9□□□□□ -0.18
FOXN3-214ENST00000557258 ZNF22P17026 224 aaPredicted RBP13.9□□□□□ -0.18
FOXN3-214ENST00000557258 ATRQ13535 2644 aa13.9□□□□□ -0.18
FOXN3-214ENST00000557258 TRAV8-3A0A0A6YYJ7 113 aa13.9□□□□□ -0.18
FOXN3-214ENST00000557258 A0A0J9YY99 117 aa13.9□□□□□ -0.18
FOXN3-214ENST00000557258 TEX29Q8N6K0 151 aa13.9□□□□□ -0.18
FOXN3-214ENST00000557258 TRRAPQ9Y4A5 3859 aa13.9□□□□□ -0.19
FOXN3-214ENST00000557258 PAPPA-AS1Q5QFB9 102 aa13.89□□□□□ -0.19
FOXN3-214ENST00000557258 NOP10Q9NPE3 64 aaKnown RBP13.89□□□□□ -0.19
FOXN3-214ENST00000557258 LGALS3P17931 250 aaKnown RBP13.89□□□□□ -0.19
FOXN3-214ENST00000557258 CHCHD7Q9BUK0 85 aa13.89□□□□□ -0.19
FOXN3-214ENST00000557258 RHODO00212 210 aa13.88□□□□□ -0.19
FOXN3-214ENST00000557258 TAL2Q16559 108 aa13.88□□□□□ -0.19
FOXN3-214ENST00000557258 Q6ZUT4 128 aa13.88□□□□□ -0.19
FOXN3-214ENST00000557258 VPS25Q9BRG1 176 aa13.88□□□□□ -0.19
FOXN3-214ENST00000557258 H3BMG7 143 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 AMELXQ99217 191 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 PGPEP1Q9NXJ5 209 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 TMEM223A0PJW6 202 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 GIG44P09565 113 aaPredicted RBP13.87□□□□□ -0.19
FOXN3-214ENST00000557258 HIVEP1P15822 2718 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 LINC01549A6NIU2 74 aa13.87□□□□□ -0.19
FOXN3-214ENST00000557258 ZNF418Q8TF45 676 aaPredicted RBP13.87□□□□□ -0.19
FOXN3-214ENST00000557258 NFE4Q86UQ8 179 aa13.86□□□□□ -0.19
FOXN3-214ENST00000557258 TRAV25A0A0B4J276 109 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 NDUFA7O95182 113 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 RS1O15537 224 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 UBE2D4Q9Y2X8 147 aa13.85□□□□□ -0.19
FOXN3-214ENST00000557258 HILS1P60008 231 aa13.84□□□□□ -0.19
FOXN3-214ENST00000557258 GAGE7O76087 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 SPINK8P0C7L1 97 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 RRN3P1Q2M238 152 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 SPATA3Q8NHX4 192 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE12JA6NER3 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE4Q13068 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE5Q13069 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 GAGE13Q4V321 117 aa13.83□□□□□ -0.2
FOXN3-214ENST00000557258 C16orf95Q9H693 158 aa13.82□□□□□ -0.2
FOXN3-214ENST00000557258 LOC100131303A0A0U1RQF7 123 aa13.82□□□□□ -0.2
FOXN3-214ENST00000557258 IGLV1-51P01701 117 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 IGHV3-30-3P0DP02 117 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 RPL24P83731 157 aaKnown RBP13.81□□□□□ -0.2
FOXN3-214ENST00000557258 C10orf126Q8N4M7 172 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 OR5A1Q8NGJ0 315 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 EDA2RQ9HAV5 297 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 NPC2P61916 151 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 SLC25A29Q8N8R3 303 aa13.81□□□□□ -0.2
FOXN3-214ENST00000557258 LEPROTO15243 131 aa13.8□□□□□ -0.2
FOXN3-214ENST00000557258 LY6G6DO95868 133 aa13.8□□□□□ -0.2
FOXN3-214ENST00000557258 WFDC2Q14508 124 aa13.8□□□□□ -0.2
FOXN3-214ENST00000557258 H7C2G1 150 aa13.8□□□□□ -0.2
FOXN3-214ENST00000557258 TMEM263Q8WUH6 116 aaKnown RBP13.8□□□□□ -0.2
FOXN3-214ENST00000557258 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
FOXN3-214ENST00000557258 C19orf73Q9NVV2 129 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms