RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 NIT1Q86X76 327 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 Q9UF83 564 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
PCNX4-213ENST00000556907 VCYO14598 125 aa11.37□□□□□ -0.59
PCNX4-213ENST00000556907 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
PCNX4-213ENST00000556907 GAGE12JA6NER3 117 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 I3L3M4 83 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 TCAPO15273 167 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 SNRPEP62304 92 aaKnown RBP11.36□□□□□ -0.59
PCNX4-213ENST00000556907 GAGE1Q13065 139 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 GAGE4Q13068 117 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 GAGE5Q13069 117 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 GAGE13Q4V321 117 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 HIST3H2BBQ8N257 126 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 ZNRF2Q8NHG8 242 aa11.36□□□□□ -0.59
PCNX4-213ENST00000556907 NUPR1O60356 82 aa11.35□□□□□ -0.59
PCNX4-213ENST00000556907 HSBP1O75506 76 aa11.35□□□□□ -0.59
PCNX4-213ENST00000556907 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
PCNX4-213ENST00000556907 KIR2DL4Q99706 377 aa11.35□□□□□ -0.59
PCNX4-213ENST00000556907 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
PCNX4-213ENST00000556907 LYSTQ99698 3801 aa11.35□□□□□ -0.59
PCNX4-213ENST00000556907 KMT2CQ8NEZ4 4911 aaKnown RBP11.34□□□□□ -0.59
PCNX4-213ENST00000556907 TSHBP01222 138 aa11.34□□□□□ -0.59
PCNX4-213ENST00000556907 TIRAPP58753 221 aa11.34□□□□□ -0.59
PCNX4-213ENST00000556907 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
PCNX4-213ENST00000556907 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
PCNX4-213ENST00000556907 LAGE3Q14657 143 aa11.33□□□□□ -0.6
PCNX4-213ENST00000556907 ESRGQ1W209 222 aa11.33□□□□□ -0.6
PCNX4-213ENST00000556907 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
PCNX4-213ENST00000556907 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.6
PCNX4-213ENST00000556907 A0A096LNJ9 63 aa11.32□□□□□ -0.6
PCNX4-213ENST00000556907 AMTP48728 403 aa11.32□□□□□ -0.6
PCNX4-213ENST00000556907 LYPD5Q6UWN5 251 aa11.32□□□□□ -0.6
PCNX4-213ENST00000556907 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
PCNX4-213ENST00000556907 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
PCNX4-213ENST00000556907 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
PCNX4-213ENST00000556907 HBDP02042 147 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 FCER1GP30273 86 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 COTL1Q14019 142 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 PDZD11Q5EBL8 140 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 ATP6V0E2Q8NHE4 81 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 DNAH1Q9P2D7 4330 aa11.31□□□□□ -0.6
PCNX4-213ENST00000556907 IGHV3-38A0A0C4DH36 116 aa11.3□□□□□ -0.6
PCNX4-213ENST00000556907 TMEM97Q5BJF2 176 aa11.3□□□□□ -0.6
PCNX4-213ENST00000556907 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
PCNX4-213ENST00000556907 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
PCNX4-213ENST00000556907 VPS13DQ5THJ4 4388 aa11.3□□□□□ -0.6
PCNX4-213ENST00000556907 IFITM10A6NMD0 228 aa11.29□□□□□ -0.6
PCNX4-213ENST00000556907 S100A2P29034 98 aa11.29□□□□□ -0.6
PCNX4-213ENST00000556907 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
PCNX4-213ENST00000556907 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
PCNX4-213ENST00000556907 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
PCNX4-213ENST00000556907 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
PCNX4-213ENST00000556907 G0S2P27469 103 aa11.28□□□□□ -0.6
PCNX4-213ENST00000556907 CHCHD7Q9BUK0 85 aa11.27□□□□□ -0.61
PCNX4-213ENST00000556907 Q9H8V8 135 aa11.27□□□□□ -0.61
PCNX4-213ENST00000556907 LELP1Q5T871 98 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 C2orf66Q6UXQ4 117 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 NTM-AS1Q6ZSK4 140 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 TOMM6Q96B49 74 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 CYSLTR1Q9Y271 337 aa11.26□□□□□ -0.61
PCNX4-213ENST00000556907 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
PCNX4-213ENST00000556907 K7EP13 123 aa11.25□□□□□ -0.61
PCNX4-213ENST00000556907 FABP4P15090 132 aa11.25□□□□□ -0.61
PCNX4-213ENST00000556907 BTF3P20290 206 aaKnown RBP11.25□□□□□ -0.61
PCNX4-213ENST00000556907 TRBV25-1A0A075B6N4 114 aa11.24□□□□□ -0.61
PCNX4-213ENST00000556907 TRBV6-8A0A0A6YYG3 113 aa11.24□□□□□ -0.61
PCNX4-213ENST00000556907 SIVA1O15304 175 aa11.24□□□□□ -0.61
PCNX4-213ENST00000556907 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
PCNX4-213ENST00000556907 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
PCNX4-213ENST00000556907 LOC105371267A0A1B0GV96 52 aa11.23□□□□□ -0.61
PCNX4-213ENST00000556907 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
PCNX4-213ENST00000556907 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
PCNX4-213ENST00000556907 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
PCNX4-213ENST00000556907 H7C423 109 aa11.22□□□□□ -0.61
PCNX4-213ENST00000556907 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
PCNX4-213ENST00000556907 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
PCNX4-213ENST00000556907 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
PCNX4-213ENST00000556907 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.61
PCNX4-213ENST00000556907 ATP5LO75964 103 aa11.21□□□□□ -0.61
PCNX4-213ENST00000556907 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
PCNX4-213ENST00000556907 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
PCNX4-213ENST00000556907 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
PCNX4-213ENST00000556907 NPSP0C0P6 89 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 DNAH10OSP0CZ25 163 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 ERASQ7Z444 233 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
PCNX4-213ENST00000556907 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 PYGO1Q9Y3Y4 419 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 RYR2Q92736 4967 aa11.2□□□□□ -0.62
PCNX4-213ENST00000556907 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
PCNX4-213ENST00000556907 Q6ZR54 194 aa11.19□□□□□ -0.62
PCNX4-213ENST00000556907 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
PCNX4-213ENST00000556907 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms