RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FABP2P12104 132 aa13.22□□□□□ -0.29
SDR39U1-220ENST00000556548 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
SDR39U1-220ENST00000556548 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
SDR39U1-220ENST00000556548 J3QR89 54 aa13.21□□□□□ -0.3
SDR39U1-220ENST00000556548 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.3
SDR39U1-220ENST00000556548 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.3
SDR39U1-220ENST00000556548 CYSRT1A8MQ03 144 aa13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 FGF6P10767 208 aa13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 Q6ZTI0 123 aa13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 RAB37Q96AX2 223 aa13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 NACAE9PAV3 2078 aa13.2□□□□□ -0.3
SDR39U1-220ENST00000556548 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 CSNK1G2-AS1Q8NCQ2 148 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 TMEM263Q8WUH6 116 aaKnown RBP13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 SPATA25Q9BR10 227 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 CYSLTR1Q9Y271 337 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 H7C1H1 209 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 IGKCP01834 107 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 PTH2Q96A98 100 aa13.19□□□□□ -0.3
SDR39U1-220ENST00000556548 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 PIK3CD-AS1Q5SR53 167 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 IL17DQ8TAD2 202 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 A0A087WX48 190 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 RS1O15537 224 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 DPM2O94777 84 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 TSHBP01222 138 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 BAALCQ8WXS3 180 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 TNFRSF18Q9Y5U5 241 aa13.18□□□□□ -0.3
SDR39U1-220ENST00000556548 NBEAL2Q6ZNJ1 2754 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 I3L3M4 83 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 INSL3P51460 131 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 NMUP48645 174 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 MTURNQ8N3F0 131 aa13.17□□□□□ -0.3
SDR39U1-220ENST00000556548 SIVA1O15304 175 aa13.16□□□□□ -0.3
SDR39U1-220ENST00000556548 BOD1L2Q8IYS8 172 aa13.16□□□□□ -0.3
SDR39U1-220ENST00000556548 NEXN-AS1Q8NBZ9 246 aa13.16□□□□□ -0.3
SDR39U1-220ENST00000556548 EMP1P54849 157 aa13.16□□□□□ -0.3
SDR39U1-220ENST00000556548 RHODO00212 210 aa13.15□□□□□ -0.3
SDR39U1-220ENST00000556548 RRN3P1Q2M238 152 aa13.15□□□□□ -0.3
SDR39U1-220ENST00000556548 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 PRSS29PA6NIE9 313 aa13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 IGIPA6NJ69 53 aa13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 PHLDA1Q8WV24 401 aaPredicted RBP13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
SDR39U1-220ENST00000556548 IGKV2D-26A0A0A0MRZ7 120 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 GAGE7O76087 117 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 PCP2Q8IVA1 136 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 C16orf74Q96GX8 76 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 TRAV12-1A0A0B4J245 112 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
SDR39U1-220ENST00000556548 F8VRH5 84 aa13.12□□□□□ -0.31
SDR39U1-220ENST00000556548 SMIM13P0DJ93 91 aa13.12□□□□□ -0.31
SDR39U1-220ENST00000556548 SPANXB1Q9NS25 103 aaPredicted RBP13.12□□□□□ -0.31
SDR39U1-220ENST00000556548 RHOHQ15669 191 aa13.12□□□□□ -0.31
SDR39U1-220ENST00000556548 F8W1H4 67 aa13.11□□□□□ -0.31
SDR39U1-220ENST00000556548 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
SDR39U1-220ENST00000556548 DAZ2Q13117 558 aaKnown RBP13.11□□□□□ -0.31
SDR39U1-220ENST00000556548 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
SDR39U1-220ENST00000556548 PLNP26678 52 aa13.1□□□□□ -0.31
SDR39U1-220ENST00000556548 ZNRF2Q8NHG8 242 aa13.1□□□□□ -0.31
SDR39U1-220ENST00000556548 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.31
SDR39U1-220ENST00000556548 TMEM141Q96I45 108 aa13.08□□□□□ -0.31
SDR39U1-220ENST00000556548 TIMM17AQ99595 171 aa13.08□□□□□ -0.31
SDR39U1-220ENST00000556548 CEMP1Q6PRD7 247 aaPredicted RBP13.08□□□□□ -0.32
SDR39U1-220ENST00000556548 PMVKQ15126 192 aa13.07□□□□□ -0.32
SDR39U1-220ENST00000556548 TSPAN13O95857 204 aa13.07□□□□□ -0.32
SDR39U1-220ENST00000556548 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
SDR39U1-220ENST00000556548 WFDC9Q8NEX5 89 aa13.07□□□□□ -0.32
SDR39U1-220ENST00000556548 WFDC2Q14508 124 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 IGKV2-29A2NJV5 120 aaPredicted RBP13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 LINC01549A6NIU2 74 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 K7EQD1 137 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 DNAJC30Q96LL9 226 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 OVOL2Q9BRP0 275 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
SDR39U1-220ENST00000556548 IGLV4-69A0A075B6H9 119 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 DEFB130BP0DP73 79 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 DEFB130AP0DP74 79 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 GAGE4Q13068 117 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 GAGE5Q13069 117 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 DEFB135Q30KP9 77 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
SDR39U1-220ENST00000556548 RNASE13Q5GAN3 156 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms