RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SERF1AO75920 110 aa6.44□□□□□ -1.38
ACTN1-218ENST00000556343 CEMP1Q6PRD7 247 aaPredicted RBP6.44□□□□□ -1.38
ACTN1-218ENST00000556343 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 TRAV8-6A0A0B4J262 113 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 IGHV3-38A0A0C4DH36 116 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 LINC00694P0DN24 101 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 ESDP10768 282 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
ACTN1-218ENST00000556343 AMTP48728 403 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 TIRAPP58753 221 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 TMEM243Q9BU79 118 aa6.43□□□□□ -1.38
ACTN1-218ENST00000556343 TENM3Q9P273 2699 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 A0A096LPF7 62 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 TRBV6-8A0A0A6YYG3 113 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 H7C423 109 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 HBDP02042 147 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 CCL18P55774 89 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 SNRPEP62304 92 aaKnown RBP6.42□□□□□ -1.38
ACTN1-218ENST00000556343 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 Q9UF83 564 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 CYSLTR1Q9Y271 337 aa6.42□□□□□ -1.38
ACTN1-218ENST00000556343 TSHBP01222 138 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 LELP1Q5T871 98 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 DGAT2L7PQ6IED9 249 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 PACRGQ96M98 296 aaPredicted RBP6.41□□□□□ -1.38
ACTN1-218ENST00000556343 CHCHD5Q9BSY4 110 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 HSPB8Q9UJY1 196 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
ACTN1-218ENST00000556343 C5orf52A6NGY3 159 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 ATP5LO75964 103 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 AMMECR1LQ6DCA0 310 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 LYPD5Q6UWN5 251 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 C2orf66Q6UXQ4 117 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 C20orf203Q8NBC4 194 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 URB1-AS1Q96HZ7 61 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
ACTN1-218ENST00000556343 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 NPSP0C0P6 89 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 MUC7Q8TAX7 377 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 TOMM6Q96B49 74 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 TMEM141Q96I45 108 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 SPANXA1Q9NS26 97 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
ACTN1-218ENST00000556343 DNAH7Q8WXX0 4024 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-218ENST00000556343 NUPR1O60356 82 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 ZNF25P17030 456 aaPredicted RBP6.38□□□□□ -1.39
ACTN1-218ENST00000556343 PDZD11Q5EBL8 140 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 Q6ZN92 141 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 NTM-AS1Q6ZSK4 140 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 ERASQ7Z444 233 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 HIST3H2BBQ8N257 126 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 DEFB104AQ8WTQ1 72 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 CHCHD7Q9BUK0 85 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 COL7A1Q02388 2944 aa6.38□□□□□ -1.39
ACTN1-218ENST00000556343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
ACTN1-218ENST00000556343 A0A087WX48 190 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
ACTN1-218ENST00000556343 FABP4P15090 132 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 LINC00310P59036 64 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 GAGE6Q13070 117 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 ESRGQ1W209 222 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 TIMM17AQ99595 171 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 MAP1LC3CQ9BXW4 147 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 APLNQ9ULZ1 77 aa6.37□□□□□ -1.39
ACTN1-218ENST00000556343 CSDC2Q9Y534 153 aaKnown RBP6.37□□□□□ -1.39
ACTN1-218ENST00000556343 PRSS1P07477 247 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 FGF6P10767 208 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 AKR1D1P51857 326 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 ZFAND6Q6FIF0 208 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
ACTN1-218ENST00000556343 OR5A1Q8NGJ0 315 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 VCX2Q9H322 139 aa6.36□□□□□ -1.39
ACTN1-218ENST00000556343 TRAV9-2A0A087WT02 112 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 C20orf202A1L168 122 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 RPL39P62891 51 aaKnown RBP6.35□□□□□ -1.39
ACTN1-218ENST00000556343 MRPS36P82909 103 aaKnown RBP6.35□□□□□ -1.39
ACTN1-218ENST00000556343 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 C2orf88Q9BSF0 95 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 UBE2D4Q9Y2X8 147 aa6.35□□□□□ -1.39
ACTN1-218ENST00000556343 MRPS16Q9Y3D3 137 aaKnown RBP6.35□□□□□ -1.39
ACTN1-218ENST00000556343 TEX43Q6ZNM6 134 aa6.34□□□□□ -1.39
ACTN1-218ENST00000556343 UPK3BQ9BT76 320 aa6.34□□□□□ -1.39
ACTN1-218ENST00000556343 LINC00588Q9Y4M8 146 aa6.34□□□□□ -1.39
ACTN1-218ENST00000556343 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.4
ACTN1-218ENST00000556343 A0A096LNJ9 63 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms