RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 F6UZH7 168 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 PHOX2AO14813 284 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 ZNF253O75346 499 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 CST7O76096 145 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 FGF7P21781 194 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 MEF2BQ02080 365 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-239ENST00000556315 SLC38A11Q08AI6 406 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-239ENST00000556315 ADAMTSL4-AS1Q5T5F5 129 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 DPH3P1Q9H4G8 78 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 GNG13Q9P2W3 67 aa3.11□□□□□ -1.91
ATXN3-239ENST00000556315 TRBV7-9A0A0J9YWB2 115 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 GGTLC3B5MD39 225 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 H3BP45 60 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 M0R3E3 92 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 COX7A2P2O60397 106 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 CXCL1P09341 107 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H1EP10412 219 aaKnown RBP3.1□□□□□ -1.91
ATXN3-239ENST00000556315 GATA1P15976 413 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-239ENST00000556315 AKR1C3P42330 323 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM78Q5T7P6 136 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 C10orf113Q5VZT2 155 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 Q6ZQT7 251 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 ZFAND2AQ8N6M9 145 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 OCC1Q8TAD7 63 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 PRADC1Q9BSG0 188 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 GTSF1LQ9H1H1 148 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 ZNF492Q9P255 531 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 PYGO1Q9Y3Y4 419 aa3.1□□□□□ -1.91
ATXN3-239ENST00000556315 TRBV19A0A075B6N1 114 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 IGHV3-16A0A0C4DH30 117 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 TRBV6-4A0A1B0GX49 114 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 M0R2P5 195 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 ZNF138P52744 262 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
ATXN3-239ENST00000556315 RAB31Q13636 194 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 C14orf177Q52M58 125 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 MUC21Q5SSG8 566 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 PRR9Q5T870 116 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 FAM159AQ6UWV7 190 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 DAZ4Q86SG3 579 aaKnown RBP3.09□□□□□ -1.91
ATXN3-239ENST00000556315 SLC25A29Q8N8R3 303 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 NPCDR1Q9BY65 106 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
ATXN3-239ENST00000556315 DAZ3Q9NR90 486 aaKnown RBP3.09□□□□□ -1.91
ATXN3-239ENST00000556315 TNXBP22105 4242 aa3.09□□□□□ -1.92
ATXN3-239ENST00000556315 IGKV2D-24A0A075B6R9 120 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 A0A087X002 238 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 A0A1W2PPV4 95 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 FBLL1A6NHQ2 334 aaKnown RBP3.08□□□□□ -1.92
ATXN3-239ENST00000556315 CXorf1O96002 111 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 OR10J4P0C629 311 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 STAG3L2P0CL84 134 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 STAG3L3P0CL85 134 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 ESDP10768 282 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 CDC34P49427 236 aaPredicted RBP3.08□□□□□ -1.92
ATXN3-239ENST00000556315 CEBPGP53567 150 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 RANP62826 216 aaKnown RBP3.08□□□□□ -1.92
ATXN3-239ENST00000556315 PDE6HQ13956 83 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 RHOHQ15669 191 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 ADIRFQ15847 76 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 TMEM183BQ1AE95 376 aa3.08□□□□□ -1.92
ATXN3-239ENST00000556315 EXOC3-AS1Q8N2X6 119 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms