RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ST20Q9HBF5 79 aa4.61□□□□□ -1.67
LINC00517-202ENST00000554257 K7EMI3 77 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 PPP1R17O96001 155 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 NIT1Q86X76 327 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 C15orf53Q8NAA6 179 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 MUC7Q8TAX7 377 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 NUPR2A6NF83 97 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 I3L3M4 83 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 PRADC1Q9BSG0 188 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 ICOSQ9Y6W8 199 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 IGHV1-24A0A0C4DH33 117 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 IGIPA6NJ69 53 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 SERF1AO75920 110 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 Q8N3U1 123 aa4.6□□□□□ -1.67
LINC00517-202ENST00000554257 TRBV6-8A0A0A6YYG3 113 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 IGHV3-38A0A0C4DH36 116 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 LINC00173Q6ZV60 143 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 MRPL52Q86TS9 123 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 TOMM6Q96B49 74 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 CHCHD1Q96BP2 118 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 PACRGQ96M98 296 aaPredicted RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 MAP1LC3AQ9H492 121 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 F5H697 171 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 VCYO14598 125 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 TCAPO15273 167 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 TCTAP57738 103 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 ATP6V0E2Q8NHE4 81 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 RPL36ALQ969Q0 106 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
LINC00517-202ENST00000554257 MRPS16Q9Y3D3 137 aaKnown RBP4.59□□□□□ -1.67
LINC00517-202ENST00000554257 LINC00614P0C842 121 aa4.59□□□□□ -1.68
LINC00517-202ENST00000554257 MRPL23Q16540 153 aaKnown RBP4.59□□□□□ -1.68
LINC00517-202ENST00000554257 HIST3H2BBQ8N257 126 aa4.59□□□□□ -1.68
LINC00517-202ENST00000554257 PKHD1P08F94 4074 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 HTN3P15516 51 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 LELP1Q5T871 98 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 SH2D6Q7Z4S9 175 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 SPATA12Q7Z6I5 190 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 C20orf203Q8NBC4 194 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 KRTAP26-1Q6PEX3 210 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 TIMM21Q9BVV7 248 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 CSDC2Q9Y534 153 aaKnown RBP4.58□□□□□ -1.68
LINC00517-202ENST00000554257 TNFRSF18Q9Y5U5 241 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 LOC389332A0A1B0GUA5 103 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 H7C423 109 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 RPL39P62891 51 aaKnown RBP4.58□□□□□ -1.68
LINC00517-202ENST00000554257 Q8N976 141 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 PYGO1Q9Y3Y4 419 aa4.58□□□□□ -1.68
LINC00517-202ENST00000554257 C1orf196B1AJZ1 125 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 C3orf84H3BNL1 204 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 NPSP0C0P6 89 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 DNAH10OSP0CZ25 163 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 LAGE3Q14657 143 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 PMCHL1Q16048 86 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 WFDC10BQ8IUB3 73 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.57□□□□□ -1.68
LINC00517-202ENST00000554257 DEFB104AQ8WTQ1 72 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 IGLL5B9A064 214 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 FCER1GP30273 86 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 AMELXQ99217 191 aa4.57□□□□□ -1.68
LINC00517-202ENST00000554257 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
LINC00517-202ENST00000554257 PMCHP20382 165 aa4.56□□□□□ -1.68
LINC00517-202ENST00000554257 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
LINC00517-202ENST00000554257 IGLV4-60A0A075B6I1 120 aa4.56□□□□□ -1.68
LINC00517-202ENST00000554257 MRPS36P82909 103 aaKnown RBP4.56□□□□□ -1.68
LINC00517-202ENST00000554257 CTAG1AP78358 180 aa4.56□□□□□ -1.68
LINC00517-202ENST00000554257 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
LINC00517-202ENST00000554257 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
LINC00517-202ENST00000554257 RAB5BP61020 215 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 MPV17L2Q567V2 206 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 TMEM97Q5BJF2 176 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 ZFAND6Q6FIF0 208 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 Q6ZR54 194 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 ORMDL2Q53FV1 153 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 TIMM17AQ99595 171 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 CDC42SE2Q9NRR3 84 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 AP5S1Q9NUS5 200 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 NUDT3O95989 172 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 LGALS9CQ6DKI2 356 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 C2orf66Q6UXQ4 117 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
LINC00517-202ENST00000554257 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
LINC00517-202ENST00000554257 DYNC1H1Q14204 4646 aaKnown RBP4.54□□□□□ -1.68
LINC00517-202ENST00000554257 COTL1Q14019 142 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 TRBV25-1A0A075B6N4 114 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 NDUFA6P56556 154 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
LINC00517-202ENST00000554257 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 OPRPNQ99935 248 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms