RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 IGLV10-54A0A075B6I4 117 aa11.33□□□□□ -0.6
SDR39U1-206ENST00000553930 K7EN84 100 aa11.33□□□□□ -0.6
SDR39U1-206ENST00000553930 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
SDR39U1-206ENST00000553930 RNASE7Q9H1E1 156 aaKnown RBP11.33□□□□□ -0.6
SDR39U1-206ENST00000553930 LRP1Q07954 4544 aaKnown RBP11.33□□□□□ -0.6
SDR39U1-206ENST00000553930 UBE2L6O14933 153 aa11.32□□□□□ -0.6
SDR39U1-206ENST00000553930 COTL1Q14019 142 aa11.32□□□□□ -0.6
SDR39U1-206ENST00000553930 AMTP48728 403 aa11.31□□□□□ -0.6
SDR39U1-206ENST00000553930 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
SDR39U1-206ENST00000553930 FAT3Q8TDW7 4589 aa11.3□□□□□ -0.6
SDR39U1-206ENST00000553930 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
SDR39U1-206ENST00000553930 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
SDR39U1-206ENST00000553930 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
SDR39U1-206ENST00000553930 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
SDR39U1-206ENST00000553930 GTSF1Q8WW33 167 aa11.29□□□□□ -0.6
SDR39U1-206ENST00000553930 hDV102S1A0JD36 115 aa11.28□□□□□ -0.6
SDR39U1-206ENST00000553930 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
SDR39U1-206ENST00000553930 SDIM1Q6ZPB5 146 aa11.28□□□□□ -0.6
SDR39U1-206ENST00000553930 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
SDR39U1-206ENST00000553930 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.28□□□□□ -0.6
SDR39U1-206ENST00000553930 hCG_2014768A0A024R1R8 64 aa11.27□□□□□ -0.61
SDR39U1-206ENST00000553930 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
SDR39U1-206ENST00000553930 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
SDR39U1-206ENST00000553930 AKAP14Q86UN6 197 aa11.27□□□□□ -0.61
SDR39U1-206ENST00000553930 ALKAL2Q6UX46 152 aa11.26□□□□□ -0.61
SDR39U1-206ENST00000553930 AP5S1Q9NUS5 200 aa11.26□□□□□ -0.61
SDR39U1-206ENST00000553930 A0A1B0GVG6 124 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 PANO1I0J062 215 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 NCR2O95944 276 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 FOXA3P55318 350 aaPredicted RBP11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 RPL39LQ96EH5 51 aaKnown RBP11.25□□□□□ -0.61
SDR39U1-206ENST00000553930 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.24□□□□□ -0.61
SDR39U1-206ENST00000553930 A8MWL6 223 aa11.24□□□□□ -0.61
SDR39U1-206ENST00000553930 OXTP01178 125 aa11.24□□□□□ -0.61
SDR39U1-206ENST00000553930 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
SDR39U1-206ENST00000553930 GAGE12HA6NDE8 117 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 H7C423 109 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 APCSP02743 223 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 SLPIP03973 132 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 CT83Q5H943 113 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 CFAP161Q6P656 301 aa11.22□□□□□ -0.61
SDR39U1-206ENST00000553930 IGKV3OR2-268A0A0C4DH90 116 aa11.21□□□□□ -0.61
SDR39U1-206ENST00000553930 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
SDR39U1-206ENST00000553930 CEBPGP53567 150 aa11.21□□□□□ -0.61
SDR39U1-206ENST00000553930 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
SDR39U1-206ENST00000553930 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
SDR39U1-206ENST00000553930 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
SDR39U1-206ENST00000553930 C15orf56Q8N910 161 aa11.2□□□□□ -0.62
SDR39U1-206ENST00000553930 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
SDR39U1-206ENST00000553930 HMCN2Q8NDA2 5059 aa11.19□□□□□ -0.62
SDR39U1-206ENST00000553930 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
SDR39U1-206ENST00000553930 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
SDR39U1-206ENST00000553930 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 I3L3M4 83 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 NDUFS6O75380 124 aaKnown RBP11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 FGF6P10767 208 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 PMCHP20382 165 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 SMIM7Q9BQ49 75 aa11.18□□□□□ -0.62
SDR39U1-206ENST00000553930 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
SDR39U1-206ENST00000553930 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
SDR39U1-206ENST00000553930 TSKUQ8WUA8 353 aa11.17□□□□□ -0.62
SDR39U1-206ENST00000553930 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 FAM210AQ96ND0 272 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
SDR39U1-206ENST00000553930 A0A087WYN8 130 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 RPS10P46783 165 aaKnown RBP11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 OR5A1Q8NGJ0 315 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 BTF3L4Q96K17 158 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 TMEM191AQ9H0A3 160 aa11.15□□□□□ -0.62
SDR39U1-206ENST00000553930 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
SDR39U1-206ENST00000553930 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
SDR39U1-206ENST00000553930 TSHBP01222 138 aa11.14□□□□□ -0.63
SDR39U1-206ENST00000553930 ESDP10768 282 aa11.14□□□□□ -0.63
SDR39U1-206ENST00000553930 OSTCQ9NRP0 149 aa11.14□□□□□ -0.63
SDR39U1-206ENST00000553930 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
SDR39U1-206ENST00000553930 COX6A2Q02221 97 aa11.13□□□□□ -0.63
SDR39U1-206ENST00000553930 FOXI1Q12951 378 aa11.13□□□□□ -0.63
SDR39U1-206ENST00000553930 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
SDR39U1-206ENST00000553930 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
SDR39U1-206ENST00000553930 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
SDR39U1-206ENST00000553930 RAB4AP20338 218 aa11.12□□□□□ -0.63
SDR39U1-206ENST00000553930 PLAC8Q9NZF1 115 aa11.12□□□□□ -0.63
SDR39U1-206ENST00000553930 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
SDR39U1-206ENST00000553930 LINC00959A0A1B0GUT2 108 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms