RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 DEFB104AQ8WTQ1 72 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 PAX4O43316 350 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 TSHBP01222 138 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
APEX1-205ENST00000553555 HTN3P15516 51 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 NANOS2P60321 138 aaKnown RBP9.64□□□□□ -0.87
APEX1-205ENST00000553555 Q6ZTC4 211 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
APEX1-205ENST00000553555 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
APEX1-205ENST00000553555 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
APEX1-205ENST00000553555 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
APEX1-205ENST00000553555 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
APEX1-205ENST00000553555 HBDP02042 147 aa9.63□□□□□ -0.87
APEX1-205ENST00000553555 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
APEX1-205ENST00000553555 GYPEP15421 78 aa9.63□□□□□ -0.87
APEX1-205ENST00000553555 NUDT3O95989 172 aa9.62□□□□□ -0.87
APEX1-205ENST00000553555 C3orf79P0CE67 100 aa9.62□□□□□ -0.87
APEX1-205ENST00000553555 LINC00173Q6ZV60 143 aa9.62□□□□□ -0.87
APEX1-205ENST00000553555 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
APEX1-205ENST00000553555 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
APEX1-205ENST00000553555 MEGF8Q7Z7M0 2845 aa9.62□□□□□ -0.87
APEX1-205ENST00000553555 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
APEX1-205ENST00000553555 A0A0J9YY99 117 aa9.61□□□□□ -0.87
APEX1-205ENST00000553555 H0Y8G0 127 aa9.6□□□□□ -0.87
APEX1-205ENST00000553555 BTF3P20290 206 aaKnown RBP9.6□□□□□ -0.87
APEX1-205ENST00000553555 COTL1Q14019 142 aa9.6□□□□□ -0.87
APEX1-205ENST00000553555 G0S2P27469 103 aa9.6□□□□□ -0.87
APEX1-205ENST00000553555 C2orf66Q6UXQ4 117 aa9.6□□□□□ -0.87
APEX1-205ENST00000553555 TOMM6Q96B49 74 aa9.6□□□□□ -0.87
APEX1-205ENST00000553555 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
APEX1-205ENST00000553555 DEFB131BA0A096LNP1 70 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 CHCHD7Q9BUK0 85 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
APEX1-205ENST00000553555 H3BNG1 76 aa9.57□□□□□ -0.88
APEX1-205ENST00000553555 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
APEX1-205ENST00000553555 PRO1933Q9H354 126 aa9.57□□□□□ -0.88
APEX1-205ENST00000553555 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
APEX1-205ENST00000553555 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
APEX1-205ENST00000553555 ATOH7Q8N100 152 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 Q8N976 141 aa9.56□□□□□ -0.88
APEX1-205ENST00000553555 A0A096LPF7 62 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 LINC00587B1AMM8 73 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 ATP5LO75964 103 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 ERASQ7Z444 233 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 SPATA12Q7Z6I5 190 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
APEX1-205ENST00000553555 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
APEX1-205ENST00000553555 ZNF664Q8N3J9 261 aa9.54□□□□□ -0.88
APEX1-205ENST00000553555 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.53□□□□□ -0.88
APEX1-205ENST00000553555 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 IGKV2-29A2NJV5 120 aaPredicted RBP9.53□□□□□ -0.88
APEX1-205ENST00000553555 IGIPA6NJ69 53 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
APEX1-205ENST00000553555 PKIAP61925 76 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 PMCHL2Q9BQD1 86 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 VAMP8Q9BV40 100 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
APEX1-205ENST00000553555 C20orf202A1L168 122 aa9.52□□□□□ -0.89
APEX1-205ENST00000553555 TMEM141Q96I45 108 aa9.52□□□□□ -0.89
APEX1-205ENST00000553555 TMEM243Q9BU79 118 aa9.52□□□□□ -0.89
APEX1-205ENST00000553555 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
APEX1-205ENST00000553555 TSTD3H0UI37 97 aa9.51□□□□□ -0.89
APEX1-205ENST00000553555 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
APEX1-205ENST00000553555 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
APEX1-205ENST00000553555 H7C423 109 aa9.5□□□□□ -0.89
APEX1-205ENST00000553555 PRSS1P07477 247 aa9.5□□□□□ -0.89
APEX1-205ENST00000553555 Q6ZN92 141 aa9.5□□□□□ -0.89
APEX1-205ENST00000553555 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
APEX1-205ENST00000553555 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 CEMP1Q6PRD7 247 aaPredicted RBP9.49□□□□□ -0.89
APEX1-205ENST00000553555 LYPD5Q6UWN5 251 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 BAALCQ8WXS3 180 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 UBE2L6O14933 153 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 NPSP0C0P6 89 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 FGF6P10767 208 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 TIRAPP58753 221 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 SPATA45Q537H7 98 aa9.49□□□□□ -0.89
APEX1-205ENST00000553555 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
APEX1-205ENST00000553555 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
APEX1-205ENST00000553555 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
APEX1-205ENST00000553555 DNAH7Q8WXX0 4024 aa9.48□□□□□ -0.89
APEX1-205ENST00000553555 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms