RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
HNRNPC-205ENST00000553300 UBE2L6O14933 153 aa8.64□□□□□ -1.03
HNRNPC-205ENST00000553300 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
HNRNPC-205ENST00000553300 DNAH8Q96JB1 4490 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 TRAV8-4A0A0B4J246 113 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 A0A1B0GUT8 65 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 LCE2BO14633 110 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 NCR2O95944 276 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 REG3AQ06141 175 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 TMEM241Q24JQ0 296 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 FAT1Q14517 4588 aa8.63□□□□□ -1.03
HNRNPC-205ENST00000553300 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
HNRNPC-205ENST00000553300 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
HNRNPC-205ENST00000553300 J3QL48 77 aa8.62□□□□□ -1.03
HNRNPC-205ENST00000553300 AMTP48728 403 aa8.62□□□□□ -1.03
HNRNPC-205ENST00000553300 PEA15Q15121 130 aa8.62□□□□□ -1.03
HNRNPC-205ENST00000553300 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 H7C423 109 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 Q5VSD8 79 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 Q6ZSA8 131 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 ISOC2Q96AB3 205 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
HNRNPC-205ENST00000553300 TRBV6-5A0A0K0K1A5 114 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 SDHAF1A6NFY7 115 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 I3L3M4 83 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 RIGQ13278 110 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 NAT8BQ9UHF3 227 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 V9GYV3 84 aa8.6□□□□□ -1.03
HNRNPC-205ENST00000553300 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 APCSP02743 223 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 RPL23P62829 140 aaKnown RBP8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 KRTAP26-1Q6PEX3 210 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
HNRNPC-205ENST00000553300 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 PPP1R17O96001 155 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 INAFM2P0DMQ5 153 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 PMCHP20382 165 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 ADIRFQ15847 76 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
HNRNPC-205ENST00000553300 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
HNRNPC-205ENST00000553300 RAB4AP20338 218 aa8.57□□□□□ -1.04
HNRNPC-205ENST00000553300 HAMPP81172 84 aa8.57□□□□□ -1.04
HNRNPC-205ENST00000553300 DEFB104AQ8WTQ1 72 aa8.57□□□□□ -1.04
HNRNPC-205ENST00000553300 A0A1B0GW15 77 aa8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 C9JQL5 133 aa8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 PRSS1P07477 247 aa8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
HNRNPC-205ENST00000553300 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 POLR2KP53803 58 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 RNF185Q96GF1 192 aa8.55□□□□□ -1.04
HNRNPC-205ENST00000553300 TRBV27A0A0K0K1C4 114 aa8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 FGF6P10767 208 aa8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 BTF3L4Q96K17 158 aa8.54□□□□□ -1.04
HNRNPC-205ENST00000553300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 VCYO14598 125 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 S100A8P05109 93 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 ESDP10768 282 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 SCXQ7RTU7 201 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
HNRNPC-205ENST00000553300 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 LINC00862A6NCI5 91 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 GAS8-AS1O95177 125 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 RAB14P61106 215 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 SMAGPQ0VAQ4 97 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
HNRNPC-205ENST00000553300 TSHBP01222 138 aa8.51□□□□□ -1.05
HNRNPC-205ENST00000553300 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
HNRNPC-205ENST00000553300 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
HNRNPC-205ENST00000553300 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
HNRNPC-205ENST00000553300 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 GAGE12HA6NDE8 117 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 FCER1GP30273 86 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 569.3 ms