RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 UBE2L3P68036 154 aaKnown RBP0.86□□□□□ -2.27
LSM6P2-201ENST00000552208 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
LSM6P2-201ENST00000552208 TCEAL7Q9BRU2 100 aa0.86□□□□□ -2.27
LSM6P2-201ENST00000552208 LENEPQ9Y5L5 61 aa0.86□□□□□ -2.27
LSM6P2-201ENST00000552208 MRC1P22897 1456 aa0.86□□□□□ -2.27
LSM6P2-201ENST00000552208 LOC285556D6RIA3 1793 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 TMEM14DPA8MWL7 114 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 ATP6V1G2-DDX39BF2Z307 99 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 PPP1R17O96001 155 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 IFITM1P13164 125 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 ATP5EP56381 51 aaPredicted RBP0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 SVBPQ8N300 66 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 TSLPQ969D9 159 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 TNS1Q9HBL0 1735 aaKnown RBP0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 SCP2D1Q9UJQ7 156 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 GOLGA3Q08378 1498 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 USP24Q9UPU5 2620 aa0.85□□□□□ -2.27
LSM6P2-201ENST00000552208 ZFYVE16Q7Z3T8 1539 aa0.84□□□□□ -2.27
LSM6P2-201ENST00000552208 TRAV1-2A0A0B4J238 106 aa0.84□□□□□ -2.27
LSM6P2-201ENST00000552208 HSD52Q0P140 79 aa0.84□□□□□ -2.27
LSM6P2-201ENST00000552208 Q6ZRX8 168 aa0.84□□□□□ -2.27
LSM6P2-201ENST00000552208 NDUFA4L2Q9NRX3 87 aa0.84□□□□□ -2.27
LSM6P2-201ENST00000552208 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.28
LSM6P2-201ENST00000552208 ARFGEF1Q9Y6D6 1849 aa0.84□□□□□ -2.28
LSM6P2-201ENST00000552208 PARP14Q460N5 1801 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 PATJQ8NI35 1801 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 TRBV7-3A0A075B6L6 115 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 FAM24AA6NFZ4 105 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 GTF2H5Q6ZYL4 71 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 BAGE3Q86Y29 109 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 PRR15LQ9BU68 103 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 ZFHX3Q15911 3703 aa0.83□□□□□ -2.28
LSM6P2-201ENST00000552208 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
LSM6P2-201ENST00000552208 G3V318 75 aa0.82□□□□□ -2.28
LSM6P2-201ENST00000552208 DOCK1Q14185 1865 aa0.82□□□□□ -2.28
LSM6P2-201ENST00000552208 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 SPINK8P0C7L1 97 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 DCDP81605 110 aaKnown RBP0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 AMELXQ99217 191 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 MGST2Q99735 147 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 SCAPERQ9BY12 1400 aa0.81□□□□□ -2.28
LSM6P2-201ENST00000552208 M0R135 149 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 RBP2P50120 134 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 SPINK7P58062 85 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 SPAG11BQ08648 103 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 SPAG11AQ6PDA7 123 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 R4GMQ9 66 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 PRDM2Q13029 1718 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 SPHKAPQ2M3C7 1700 aa0.8□□□□□ -2.28
LSM6P2-201ENST00000552208 ARHGAP5Q13017 1502 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 COL6A3P12111 3177 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 SMIM6P0DI80 62 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 MYOZ3Q8TDC0 251 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 PROK2Q9HC23 129 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 DYNLRB1Q9NP97 96 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 V9GYH0 126 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 LAMC3Q9Y6N6 1575 aa0.79□□□□□ -2.28
LSM6P2-201ENST00000552208 IFT172Q9UG01 1749 aa0.78□□□□□ -2.28
LSM6P2-201ENST00000552208 APCP25054 2843 aa0.78□□□□□ -2.28
LSM6P2-201ENST00000552208 TMEM262E9PQX1 116 aa0.78□□□□□ -2.28
LSM6P2-201ENST00000552208 H3BQ15 152 aa0.78□□□□□ -2.28
LSM6P2-201ENST00000552208 TMEM218A2RU14 115 aa0.77□□□□□ -2.29
LSM6P2-201ENST00000552208 HMGN4O00479 90 aa0.77□□□□□ -2.29
LSM6P2-201ENST00000552208 GCHFRP30047 84 aa0.77□□□□□ -2.29
LSM6P2-201ENST00000552208 FAM213BQ8TBF2 198 aa0.77□□□□□ -2.29
LSM6P2-201ENST00000552208 NAV3Q8IVL0 2385 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 MRC2Q9UBG0 1479 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 TRAV30A0A087WSZ9 112 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 NMBP08949 121 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 GNG11P61952 73 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 CFAP126Q5VTH2 177 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 FAM167A-AS1Q96KT0 104 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 CDC42SE2Q9NRR3 84 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 PLAC8Q9NZF1 115 aa0.76□□□□□ -2.29
LSM6P2-201ENST00000552208 CNTLNQ9NXG0 1405 aa0.75□□□□□ -2.29
LSM6P2-201ENST00000552208 BDP1A6H8Y1 2624 aa0.75□□□□□ -2.29
LSM6P2-201ENST00000552208 MYOM1P52179 1685 aa0.75□□□□□ -2.29
LSM6P2-201ENST00000552208 CC2D2AQ9P2K1 1620 aa0.75□□□□□ -2.29
LSM6P2-201ENST00000552208 ABCC5O15440 1437 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 VPS8Q8N3P4 1428 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 TRAV22A0A0B4J277 110 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 IGLC7A0M8Q6 106 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 F8VRH5 84 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 UBE2D3P61077 147 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 UBE2D2P62837 147 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 LINC00472Q9H8W2 130 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 UBR4Q5T4S7 5183 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 MYH8P13535 1937 aa0.74□□□□□ -2.29
LSM6P2-201ENST00000552208 CTXND1A0A1B0GTU2 59 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 CHKB-CPT1BH3BT56 60 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 Q0VG73 95 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 ACBD7Q8N6N7 88 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 LINC01558Q9Y6Z2 57 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 UNC13BO14795 1591 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 ARHGEF5Q12774 1597 aa0.73□□□□□ -2.29
LSM6P2-201ENST00000552208 ZNF609O15014 1411 aa0.72□□□□□ -2.29
LSM6P2-201ENST00000552208 LOC285095A0A1B0GVY8 99 aa0.72□□□□□ -2.29
LSM6P2-201ENST00000552208 NAP1L6A6NFF2 107 aa0.72□□□□□ -2.29
LSM6P2-201ENST00000552208 UQCR11O14957 56 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms