RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PRR9Q5T870 116 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF660Q6AZW8 331 aaPredicted RBP2.98□□□□□ -1.93
CPSF6-206ENST00000550987 BPIFB6Q8NFQ5 453 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 OR5D16Q8NGK9 328 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 DERL1Q9BUN8 251 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 BANF2Q9H503 90 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 OR5V1Q9UGF6 321 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 TRAV27A0A087WT01 109 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 LOC100130705A0A1B0GUX0 176 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 C9JCJ5 164 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 PLA2G10O15496 165 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 NAPSAO96009 420 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 INSL3P51460 131 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 FOXA1P55317 472 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H4AP62805 103 aaKnown RBP2.97□□□□□ -1.93
CPSF6-206ENST00000550987 EIF5AP63241 154 aaKnown RBP2.97□□□□□ -1.93
CPSF6-206ENST00000550987 TMEM155Q4W5P6 130 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 FOXI2Q6ZQN5 318 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 Q6ZQT7 251 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 GPHB5Q86YW7 130 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 TTC9CQ8N5M4 171 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 C3orf22Q8N5N4 141 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 TMEM106BQ9NUM4 274 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 PHLDA3Q9Y5J5 127 aa2.97□□□□□ -1.93
CPSF6-206ENST00000550987 H3BMG7 143 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 H3BMM0 161 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 PGLYRP1O75594 196 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-206ENST00000550987 CD14P08571 375 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 TRAPPC2P0DI81 140 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 TRAPPC2BP0DI82 140 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 ETV6P41212 452 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 FOXA3P55318 350 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-206ENST00000550987 LINC01545Q5VT33 79 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 IZUMO2Q6UXV1 221 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 PHF5AQ7RTV0 110 aaKnown RBP2.96□□□□□ -1.94
CPSF6-206ENST00000550987 LYZL2Q7Z4W2 148 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 PACRGLQ8N7B6 248 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 C5orf17Q8NAS9 161 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 OR4K13Q8NH42 304 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 UBE2WQ96B02 151 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 NAA60Q9H7X0 242 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 SLC39A9Q9NUM3 307 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 KLK5Q9Y337 293 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-206ENST00000550987 AP4S1Q9Y587 144 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
CPSF6-206ENST00000550987 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 M0R378 163 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 UBL3O95164 117 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 IGKV1-5P01602 117 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 IGHV1-69P01742 117 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 IGHV3-53P01767 116 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 PRM2P04554 102 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 LINC00032P0C843 101 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 CGB3P0DN86 165 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 CGB7P0DN87 165 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 PYYP10082 97 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 CSN1S1P47710 185 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 HBBP68871 147 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 AKR1C1Q04828 323 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 PYY3Q5JQD4 70 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 AADACL3Q5VUY0 350 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 EIF5AL1Q6IS14 154 aaKnown RBP2.95□□□□□ -1.94
CPSF6-206ENST00000550987 ZCCHC23Q6ZST2 131 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 SVBPQ8N300 66 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 OR10P1Q8NGE3 313 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 RAB37Q96AX2 223 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 CIB3Q96Q77 187 aaPredicted RBP2.95□□□□□ -1.94
CPSF6-206ENST00000550987 ZNF286AQ9HBT8 521 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 IL36BQ9NZH7 164 aa2.95□□□□□ -1.94
CPSF6-206ENST00000550987 TRBV24-1A0A075B6N3 115 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 TRGV10A0A0A0MS01 117 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 TCRBV3S1A0A5B6 114 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 G3V3Q6 166 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 TMEM256-PLSCR3K7ERE1 68 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 UQCRQO14949 82 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 YPEL1O60688 119 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 HIST1H2BKO60814 126 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 MPC2O95563 127 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 HIST1H2BJP06899 126 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 HLA-DRB4P13762 266 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 ZNF80P51504 273 aaPredicted RBP2.94□□□□□ -1.94
CPSF6-206ENST00000550987 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 LINC00299Q6ZSB3 139 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 NDUFA11Q86Y39 141 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 LYPD1Q8N2G4 141 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 C10orf111Q8N326 155 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 KCNRGQ8N5I3 272 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 OR5C1Q8NGR4 320 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 C10orf82Q8WW14 230 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 DPY30Q9C005 99 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 SAR1AQ9NR31 198 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 HLA-DRB4X5D2U9 266 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 KMT2DO14686 5537 aa2.94□□□□□ -1.94
CPSF6-206ENST00000550987 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
CPSF6-206ENST00000550987 ZNF727A8MUV8 499 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms