RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 IGLL5B9A064 214 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 NUPR1O60356 82 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 SERF1AO75920 110 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 NCR2O95944 276 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 PMCHP20382 165 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 IFI27P40305 119 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 ZNF56Q15929 161 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 Q8N8P6 123 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 ZNF479Q96JC4 524 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 PACRGQ96M98 296 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 MAP1LC3AQ9H492 121 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 NXT2Q9NPJ8 142 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-209ENST00000550587 IGLV2-18A0A075B6J9 118 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 LOC389332A0A1B0GUA5 103 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 TEX48A0A1B0GUV7 120 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 LOC105371267A0A1B0GV96 52 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 K7EMI3 77 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 VCYO14598 125 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 SPART-AS1P0CW21 52 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 DEFB130BP0DP73 79 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 DEFB130AP0DP74 79 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 FA2HQ7L5A8 372 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 RPL39LQ96EH5 51 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 DNAJC30Q96LL9 226 aa4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 C11orf68Q9H3H3 251 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-209ENST00000550587 TRGV4A0A0C4DH28 118 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 TRBV10-1A0A0K0K1A3 114 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 TRBV6-4A0A1B0GX49 114 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 IFITM10A6NMD0 228 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 DEFB4AO15263 64 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 HSBP1O75506 76 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 S100A2P29034 98 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 DAD1P61803 113 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 SLC25A29Q8N8R3 303 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 TMEM18Q96B42 140 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
DEPDC4-209ENST00000550587 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 TRBV7-3A0A075B6L6 115 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 TRAV10A0A0B4J240 114 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 K7EQD1 137 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 TCAPO15273 167 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 FABP4P15090 132 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 G0S2P27469 103 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 LAGE3Q14657 143 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 PDZD11Q5EBL8 140 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 FAM19A2Q8N3H0 131 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 HIST1H2BLQ99880 126 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 Q9UF83 564 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 HHLA3Q9XRX5 114 aa4.31□□□□□ -1.72
DEPDC4-209ENST00000550587 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 I3L3M4 83 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 ATP5G1P05496 136 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 P0DMU3 169 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 FAM231AP0DMU4 169 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 FAM231CP0DMU5 169 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 FCER1GP30273 86 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 AMTP48728 403 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 ORMDL2Q53FV1 153 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 KIR2DL4Q99706 377 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 PRADC1Q9BSG0 188 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 PRO0255Q9UI72 69 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 SACSQ9NZJ4 4579 aa4.3□□□□□ -1.72
DEPDC4-209ENST00000550587 A0A096LNJ9 63 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 IGHV1-24A0A0C4DH33 117 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 B5MCH6 92 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 LEPROTL1O95214 131 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 HBDP02042 147 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 CRYBA4P53673 196 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 UBE2D3P61077 147 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 UBE2D2P62837 147 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 RHOHQ15669 191 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 DAZ4Q86SG3 579 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 ZNRF2Q8NHG8 242 aa4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
DEPDC4-209ENST00000550587 APLNQ9ULZ1 77 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms