RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 LCE6AA0A183 80 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 I3L3M4 83 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 ATP5G1P05496 136 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 FCER1GP30273 86 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
HDAC7-227ENST00000548080 RHOHQ15669 191 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
HDAC7-227ENST00000548080 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.46
HDAC7-227ENST00000548080 A0A096LNJ9 63 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 HBDP02042 147 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
HDAC7-227ENST00000548080 SACSQ9NZJ4 4579 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 LY6G6CO95867 125 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 NUDT3O95989 172 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 LINC00476Q8WZB0 136 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 DNAH1Q9P2D7 4330 aa12.13□□□□□ -0.47
HDAC7-227ENST00000548080 GAGE12JA6NER3 117 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 TSHBP01222 138 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 CRYBA4P53673 196 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 GAGE1Q13065 139 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 GAGE4Q13068 117 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 GAGE5Q13069 117 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
HDAC7-227ENST00000548080 A0A0J9YY99 117 aa12.11□□□□□ -0.47
HDAC7-227ENST00000548080 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
HDAC7-227ENST00000548080 RYR2Q92736 4967 aa12.11□□□□□ -0.47
HDAC7-227ENST00000548080 RYR3Q15413 4870 aa12.11□□□□□ -0.47
HDAC7-227ENST00000548080 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
HDAC7-227ENST00000548080 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
HDAC7-227ENST00000548080 G0S2P27469 103 aa12.1□□□□□ -0.47
HDAC7-227ENST00000548080 UBE2D3P61077 147 aa12.1□□□□□ -0.47
HDAC7-227ENST00000548080 UBE2D2P62837 147 aa12.1□□□□□ -0.47
HDAC7-227ENST00000548080 LINC00173Q6ZV60 143 aa12.1□□□□□ -0.47
HDAC7-227ENST00000548080 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
HDAC7-227ENST00000548080 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
HDAC7-227ENST00000548080 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
HDAC7-227ENST00000548080 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 PAX4O43316 350 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 KRTDAPP60985 99 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 COTL1Q14019 142 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 TOMM6Q96B49 74 aa12.08□□□□□ -0.47
HDAC7-227ENST00000548080 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
HDAC7-227ENST00000548080 GYPEP15421 78 aa12.08□□□□□ -0.48
HDAC7-227ENST00000548080 C2orf66Q6UXQ4 117 aa12.08□□□□□ -0.48
HDAC7-227ENST00000548080 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
HDAC7-227ENST00000548080 TCTAP57738 103 aa12.07□□□□□ -0.48
HDAC7-227ENST00000548080 CYSLTR1Q9Y271 337 aa12.07□□□□□ -0.48
HDAC7-227ENST00000548080 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
HDAC7-227ENST00000548080 JOSD1Q15040 202 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-227ENST00000548080 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
HDAC7-227ENST00000548080 MAP1LC3CQ9BXW4 147 aa12.06□□□□□ -0.48
HDAC7-227ENST00000548080 ATP5LO75964 103 aa12.05□□□□□ -0.48
HDAC7-227ENST00000548080 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
HDAC7-227ENST00000548080 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
HDAC7-227ENST00000548080 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
HDAC7-227ENST00000548080 LGALS9CQ6DKI2 356 aa12.04□□□□□ -0.48
HDAC7-227ENST00000548080 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
HDAC7-227ENST00000548080 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
HDAC7-227ENST00000548080 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
HDAC7-227ENST00000548080 ATP6V0E2Q8NHE4 81 aa12.03□□□□□ -0.48
HDAC7-227ENST00000548080 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
HDAC7-227ENST00000548080 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
HDAC7-227ENST00000548080 KMT2AQ03164 3969 aa12.02□□□□□ -0.48
HDAC7-227ENST00000548080 SCGB1D1O95968 90 aa12.02□□□□□ -0.48
HDAC7-227ENST00000548080 SMIM6P0DI80 62 aa12.02□□□□□ -0.48
HDAC7-227ENST00000548080 RPL39P62891 51 aaKnown RBP12.02□□□□□ -0.48
HDAC7-227ENST00000548080 PET117Q6UWS5 81 aa12.02□□□□□ -0.48
HDAC7-227ENST00000548080 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.48
HDAC7-227ENST00000548080 TMEM97Q5BJF2 176 aa12.02□□□□□ -0.49
HDAC7-227ENST00000548080 NTM-AS1Q6ZSK4 140 aa12.02□□□□□ -0.49
HDAC7-227ENST00000548080 ERASQ7Z444 233 aa12.02□□□□□ -0.49
HDAC7-227ENST00000548080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-227ENST00000548080 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
HDAC7-227ENST00000548080 IGIPA6NJ69 53 aa12□□□□□ -0.49
HDAC7-227ENST00000548080 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
HDAC7-227ENST00000548080 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
HDAC7-227ENST00000548080 Q8N976 141 aa12□□□□□ -0.49
HDAC7-227ENST00000548080 TMEM141Q96I45 108 aa12□□□□□ -0.49
HDAC7-227ENST00000548080 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
HDAC7-227ENST00000548080 A0A096LPF7 62 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 H0Y8G0 127 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 H3BNG1 76 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 PRSS1P07477 247 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 Q6ZN92 141 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 LINC00518Q8N0U6 118 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
HDAC7-227ENST00000548080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-227ENST00000548080 C20orf202A1L168 122 aa11.98□□□□□ -0.49
HDAC7-227ENST00000548080 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-227ENST00000548080 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
HDAC7-227ENST00000548080 TRBV25-1A0A075B6N4 114 aa11.97□□□□□ -0.49
HDAC7-227ENST00000548080 TRBV6-8A0A0A6YYG3 113 aa11.97□□□□□ -0.49
HDAC7-227ENST00000548080 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
HDAC7-227ENST00000548080 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms